| Sequence 1: | NP_524660.1 | Gene: | sbr / 43944 | FlyBaseID: | FBgn0003321 | Length: | 672 | Species: | Drosophila melanogaster |
|---|---|---|---|---|---|---|---|---|---|
| Sequence 2: | NP_071335.1 | Gene: | NXF3 / 56000 | HGNCID: | 8073 | Length: | 531 | Species: | Homo sapiens |
| Alignment Length: | 587 | Identity: | 141/587 - (24%) |
|---|---|---|---|
| Similarity: | 245/587 - (41%) | Gaps: | 134/587 - (22%) |
- Green bases have known domain annotations that are detailed below.
|
Fly 2 PKRGGGSSQRYNNNVGNGGGRYNAPEDFDDFDVEDRQRRKDRNKRRVSFKPSQCLHNKKDIKLRP 66
Fly 67 EDLRRWDEDDDMSDMTTAVKDRPTSRRRGSPIPRGKFGKLMPNSFGWYQVTLQNAQIYEKETLLS 131
Fly 132 ALLAAMS-PHVFIPQYWRVERNCVIFFTDDYEAAERIQHLGKNGHLPDGYRLMPRVR-SGIPLVA 194
Fly 195 IDDAFKEK---MKVTMAKRYNIQTKALDLSRFHADPDL-----KQVFCPLFRQNVMGAAIDIMCD 251
Fly 252 NIPDLEALNLNDNSISSMEAFKGVEKRLPNLKILYLGDNKIPSLAHLVVLRNLSILELVLKNNPC 316
Fly 317 RSRYKDSQQFISEVRRKFPKLVKLDGETLEPQITFDLSEQGRLLET-KASYLCDVAGAEVVR--- 377
Fly 378 -QFLDQYFRIFDSGNRQALLDAYHEKAMLSISMPSASQAGRLNSFWKF---NRNLRRL----LNG 434
Fly 435 EENRTRNLKYGRLACVSTLDEWPKTQHDRRTFTVDLTIYNTSMMVFTVTGLFKELNDETNNPASM 499
Fly 500 ELYDVRHFARTYVVVP-QNNGFCIRNETIFITNATHE----------------QVREFKRSQHQP 547
Fly 548 AP 549 |
| Gene | Sequence | Domain | Region | External ID | Identity |
|---|---|---|---|---|---|
| sbr | NP_524660.1 | Tap-RNA_bind | 112..191 | CDD:286271 | 16/80 (20%) |
| leucine-rich repeat | 215..255 | CDD:275382 | 13/44 (30%) | ||
| LRR_RI | <223..341 | CDD:238064 | 24/122 (20%) | ||
| LRR_8 | 256..315 | CDD:290566 | 7/58 (12%) | ||
| LRR_4 | 256..298 | CDD:289563 | 6/41 (15%) | ||
| leucine-rich repeat | 256..281 | CDD:275382 | 5/24 (21%) | ||
| leucine-rich repeat | 282..305 | CDD:275382 | 1/22 (5%) | ||
| leucine-rich repeat | 306..336 | CDD:275382 | 5/29 (17%) | ||
| NTF2 | 372..531 | CDD:238403 | 62/170 (36%) | ||
| Big_3_5 | <578..>614 | CDD:293246 | |||
| TAP_C | 609..671 | CDD:197882 | |||
| NXF3 | NP_071335.1 | Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite | 33..59 | 4/19 (21%) | |
| Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite | 83..106 | 4/52 (8%) | |||
| Tap-RNA_bind | 110..192 | CDD:312616 | 18/90 (20%) | ||
| noncanonical RNP-type RNA-binding (RBD) domain | 115..192 | 16/78 (21%) | |||
| leucine-rich repeat (LRR) domains | 193..329 | 38/175 (22%) | |||
| leucine-rich repeat | 218..260 | CDD:275382 | 13/44 (30%) | ||
| leucine-rich repeat | 275..305 | CDD:275382 | 6/42 (14%) | ||
| nuclear transport factor 2 (NTF2)-like domain | 339..461 | 52/126 (41%) | |||
| NTF2 | 341..496 | CDD:238403 | 60/166 (36%) | ||
| ubiquitin-associated domain | 524..531 | 2/7 (29%) | |||
| Blue background indicates that the domain is not in the aligned region. | |||||
| Tool | Simple Score | Weighted Score | Original Tool Information | |||
|---|---|---|---|---|---|---|
| BLAST Result | Score | Score Type | Cluster ID | |||
| Compara | 0 | 0.000 | Not matched by this tool. | |||
| Domainoid | 1 | 1.000 | 112 | 1.000 | Domainoid score | I6196 |
| eggNOG | 1 | 0.900 | - | - | E1_KOG3763 | |
| Hieranoid | 1 | 1.000 | - | - | ||
| Homologene | 0 | 0.000 | Not matched by this tool. | |||
| Inparanoid | 1 | 1.050 | 277 | 1.000 | Inparanoid score | I2942 |
| Isobase | 0 | 0.000 | Not matched by this tool. | |||
| OMA | 0 | 0.000 | Not matched by this tool. | |||
| OrthoDB | 1 | 1.010 | - | - | D1051093at2759 | |
| OrthoFinder | 1 | 1.000 | - | - | FOG0000862 | |
| OrthoInspector | 1 | 1.000 | - | - | otm41330 | |
| orthoMCL | 0 | 0.000 | Not matched by this tool. | |||
| Panther | 1 | 1.100 | - | - | O | PTHR10662 |
| Phylome | 1 | 0.910 | - | - | ||
| RoundUp | 0 | 0.000 | Not matched by this tool. | |||
| SonicParanoid | 1 | 1.000 | - | - | X1267 | |
| SwiftOrtho | 0 | 0.000 | Not matched by this tool. | |||
| TreeFam | 1 | 0.960 | - | - | ||
| User_Submission | 0 | 0.000 | Not matched by this tool. | |||
| 11 | 10.930 | |||||