| Sequence 1: | NP_524660.1 | Gene: | sbr / 43944 | FlyBaseID: | FBgn0003321 | Length: | 672 | Species: | Drosophila melanogaster |
|---|---|---|---|---|---|---|---|---|---|
| Sequence 2: | XP_002730329.2 | Gene: | Nxf2 / 308653 | RGDID: | 1559530 | Length: | 619 | Species: | Rattus norvegicus |
| Alignment Length: | 645 | Identity: | 175/645 - (27%) |
|---|---|---|---|
| Similarity: | 294/645 - (45%) | Gaps: | 130/645 - (20%) |
- Green bases have known domain annotations that are detailed below.
|
Fly 43 RNKRRVSFKPSQCLHNKKDIKLRPEDLRRWDEDDDMSDMTTAVKDRPTSRRRGSPIPRGKFGKLM 107
Fly 108 PNSFGWYQVTLQNAQIYEKETLLSALLAAMSPHVFIPQYWRVERNCVIFFTDDYEAAERIQHLGK 172
Fly 173 NGHLPDGYRLMPRVRSGIPLVAIDDAFK----EKMKVTMAKRYNIQTKALDLSRFHADPDL--KQ 231
Fly 232 VFCPLFRQNVMGAAIDIMCDNIPDLEALNLNDNSISSMEAFKGVEKRLPNLKILYLGDNKIPSLA 296
Fly 297 HLVVLRNLSILELVLKNNPCRSRYKDSQQFISEVRRKFPKLVKLDGETLEPQITFDLSEQGRLLE 361
Fly 362 TKASYLCDVAGAE------VVRQFLDQYFRIFDSGNRQALLDAYHEKAMLSISMP---SASQAGR 417
Fly 418 LNSFWKFNRNLRRLLNGEEN-RTRNLKYGRLACVSTLDEWPKTQHDRRTFTVDLTIYNTSMMVFT 481
Fly 482 VTGLFKELNDETNNPASMELYDVRHFARTYVVVP-QNNGFCIRNETIFITNATHEQVREFKRSQH 545
Fly 546 QPAPGAMPSTSSAVTSPQAGAAAGLQGRLNALGVATGPVAILSGDPLAATAPVNSGSAAISTTAV 610
Fly 611 APGAQDESTKMQMIEAMSAQSQMNVIWSRKCLEETNWDFNHAAFVFEKLFKENKIPPEAF 670 |
| Gene | Sequence | Domain | Region | External ID | Identity |
|---|---|---|---|---|---|
| sbr | NP_524660.1 | Tap-RNA_bind | 112..191 | CDD:286271 | 16/78 (21%) |
| leucine-rich repeat | 215..255 | CDD:275382 | 17/41 (41%) | ||
| LRR_RI | <223..341 | CDD:238064 | 43/119 (36%) | ||
| LRR_8 | 256..315 | CDD:290566 | 18/58 (31%) | ||
| LRR_4 | 256..298 | CDD:289563 | 13/41 (32%) | ||
| leucine-rich repeat | 256..281 | CDD:275382 | 5/24 (21%) | ||
| leucine-rich repeat | 282..305 | CDD:275382 | 8/22 (36%) | ||
| leucine-rich repeat | 306..336 | CDD:275382 | 12/29 (41%) | ||
| NTF2 | 372..531 | CDD:238403 | 54/169 (32%) | ||
| Big_3_5 | <578..>614 | CDD:293246 | 2/35 (6%) | ||
| TAP_C | 609..671 | CDD:197882 | 24/62 (39%) | ||
| Nxf2 | XP_002730329.2 | Tap-RNA_bind | 121..203 | CDD:286271 | 18/102 (18%) |
| leucine-rich repeat | 229..271 | CDD:275382 | 17/41 (41%) | ||
| LRR_4 | 270..316 | CDD:289563 | 15/45 (33%) | ||
| leucine-rich repeat | 272..297 | CDD:275382 | 5/24 (21%) | ||
| leucine-rich repeat | 298..321 | CDD:275382 | 8/22 (36%) | ||
| leucine-rich repeat | 322..352 | CDD:275382 | 12/29 (41%) | ||
| NTF2_like | 385..534 | CDD:298832 | 52/157 (33%) | ||
| TAP_C | 558..619 | CDD:197882 | 25/63 (40%) |
| Tool | Simple Score | Weighted Score | Original Tool Information | |||
|---|---|---|---|---|---|---|
| BLAST Result | Score | Score Type | Cluster ID | |||
| Compara | 0 | 0.000 | Not matched by this tool. | |||
| Domainoid | 1 | 1.000 | 116 | 1.000 | Domainoid score | I5804 |
| eggNOG | 1 | 0.900 | - | - | E1_KOG3763 | |
| Hieranoid | 1 | 1.000 | - | - | ||
| Homologene | 0 | 0.000 | Not matched by this tool. | |||
| Inparanoid | 1 | 1.050 | 274 | 1.000 | Inparanoid score | I2894 |
| OMA | 0 | 0.000 | Not matched by this tool. | |||
| OrthoDB | 1 | 1.010 | - | - | D1051093at2759 | |
| OrthoFinder | 1 | 1.000 | - | - | FOG0000862 | |
| OrthoInspector | 1 | 1.000 | - | - | otm45460 | |
| orthoMCL | 1 | 0.900 | - | - | OOG6_102057 | |
| Panther | 1 | 1.100 | - | - | O | PTHR10662 |
| Phylome | 1 | 0.910 | - | - | ||
| SonicParanoid | 1 | 1.000 | - | - | X1267 | |
| SwiftOrtho | 1 | 1.000 | - | - | ||
| TreeFam | 1 | 0.960 | - | - | ||
| 13 | 12.830 | |||||