| Sequence 1: | NP_524660.1 | Gene: | sbr / 43944 | FlyBaseID: | FBgn0003321 | Length: | 672 | Species: | Drosophila melanogaster |
|---|---|---|---|---|---|---|---|---|---|
| Sequence 2: | XP_008771632.1 | Gene: | Nxf3 / 302591 | RGDID: | 1564923 | Length: | 571 | Species: | Rattus norvegicus |
| Alignment Length: | 623 | Identity: | 134/623 - (21%) |
|---|---|---|---|
| Similarity: | 241/623 - (38%) | Gaps: | 155/623 - (24%) |
- Green bases have known domain annotations that are detailed below.
|
Fly 68 DLRRWDEDDDMSDMTTAVKDRPTSRRRGSPIPRGKF--GKLMPNSFGWYQVTLQNAQIYEKETLL 130
Fly 131 SALLAAMSPHVFIPQYWRVERNCVIFFTDDYEAAERIQHLGKNGHLPDGYRLMPRVRSGIPLV-- 193
Fly 194 ------AIDDAFKEKM---KVTMAKRYNIQTKALDLSRFHADPDLKQ-----VFCPLFRQNVMGA 244
Fly 245 AIDIMCDNIPDLEALNLNDNSISSMEAFKGVEKRLPNLKILYLGDNKIPSLAHLVVLRNLSILEL 309
Fly 310 VLKNNPCRSRYKDSQQFISEVRRKFPKLVKLDG-ETLEPQITFDLSEQGRLLETKASYLCDVAGA 373
Fly 374 EVVRQFLDQYFRIFDSGNRQALLDAYHEKAMLSISMPSAS---QAGRLNSFWKFNRNLRRLLNGE 435
Fly 436 ENRTRNLKYGRLACVSTLDEWPKTQHDRRTFTVDLTIYNTSMMVFTVTGLFKELNDETNNPASME 500
Fly 501 LYDVRHFARTYVVVPQNNGFCIRNETIFITNATHEQVREFKRSQHQPAPGAMPSTSSAVTSPQAG 565
Fly 566 AAAGLQGRLNALGVATGPVAILSGDPLAATAPVNSGSAAISTTAVAPGAQDESTKMQMIEAMSAQ 630
Fly 631 SQMNVIWSRKCLEETNWDFNHAAFVFEKLFKENKIPPE 668 |
| Gene | Sequence | Domain | Region | External ID | Identity |
|---|---|---|---|---|---|
| sbr | NP_524660.1 | Tap-RNA_bind | 112..191 | CDD:286271 | 15/78 (19%) |
| leucine-rich repeat | 215..255 | CDD:275382 | 10/44 (23%) | ||
| LRR_RI | <223..341 | CDD:238064 | 18/122 (15%) | ||
| LRR_8 | 256..315 | CDD:290566 | 4/58 (7%) | ||
| LRR_4 | 256..298 | CDD:289563 | 3/41 (7%) | ||
| leucine-rich repeat | 256..281 | CDD:275382 | 3/24 (13%) | ||
| leucine-rich repeat | 282..305 | CDD:275382 | 0/22 (0%) | ||
| leucine-rich repeat | 306..336 | CDD:275382 | 4/29 (14%) | ||
| NTF2 | 372..531 | CDD:238403 | 49/161 (30%) | ||
| Big_3_5 | <578..>614 | CDD:293246 | 0/35 (0%) | ||
| TAP_C | 609..671 | CDD:197882 | 18/60 (30%) | ||
| Nxf3 | XP_008771632.1 | Tap-RNA_bind | 104..186 | CDD:286271 | 17/90 (19%) |
| leucine-rich repeat | 211..250 | CDD:275382 | 10/46 (22%) | ||
| leucine-rich repeat | 269..298 | CDD:275382 | 5/59 (8%) | ||
| NTF2_like | 333..488 | CDD:298832 | 49/162 (30%) | ||
| TAP_C | 503..563 | CDD:197882 | 21/106 (20%) |
| Tool | Simple Score | Weighted Score | Original Tool Information | |||
|---|---|---|---|---|---|---|
| BLAST Result | Score | Score Type | Cluster ID | |||
| Compara | 0 | 0.000 | Not matched by this tool. | |||
| Domainoid | 1 | 1.000 | 109 | 1.000 | Domainoid score | I6208 |
| eggNOG | 1 | 0.900 | - | - | E1_KOG3763 | |
| Hieranoid | 1 | 1.000 | - | - | ||
| Homologene | 0 | 0.000 | Not matched by this tool. | |||
| Inparanoid | 1 | 1.050 | 274 | 1.000 | Inparanoid score | I2894 |
| OMA | 0 | 0.000 | Not matched by this tool. | |||
| OrthoDB | 1 | 1.010 | - | - | D1051093at2759 | |
| OrthoFinder | 1 | 1.000 | - | - | FOG0000862 | |
| OrthoInspector | 1 | 1.000 | - | - | otm45460 | |
| orthoMCL | 0 | 0.000 | Not matched by this tool. | |||
| Panther | 1 | 1.100 | - | - | O | PTHR10662 |
| Phylome | 1 | 0.910 | - | - | ||
| SonicParanoid | 1 | 1.000 | - | - | X1267 | |
| SwiftOrtho | 1 | 1.000 | - | - | ||
| TreeFam | 1 | 0.960 | - | - | ||
| 12 | 11.930 | |||||