| Sequence 1: | NP_524660.1 | Gene: | sbr / 43944 | FlyBaseID: | FBgn0003321 | Length: | 672 | Species: | Drosophila melanogaster |
|---|---|---|---|---|---|---|---|---|---|
| Sequence 2: | NP_506568.2 | Gene: | nxf-2 / 179938 | WormBaseID: | WBGene00003835 | Length: | 405 | Species: | Caenorhabditis elegans |
| Alignment Length: | 348 | Identity: | 79/348 - (22%) |
|---|---|---|---|
| Similarity: | 156/348 - (44%) | Gaps: | 35/348 - (10%) |
- Green bases have known domain annotations that are detailed below.
|
Fly 218 LDLSRFHADPDLKQ---VFCPLFRQNVMGAAIDIMCDNIPDLEALNLNDNSISSMEAFKGVEKRL 279
Fly 280 PNLKILYLGDNKIPSLAHLVVLRNLSILELVLKNNPCRSRYKDSQQFISEVRRKFPKLVKLDGET 344
Fly 345 LEPQITFDLSEQGRLLETKASYLCDVAGAEVVRQFLDQYFRIFDSGN----RQALLDAY------ 399
Fly 400 --HEKAML-----SISMPSASQAGRLNSFWKFNRNLRRLLNGE---ENRTRNLKYGRLACVSTLD 454
Fly 455 EWPKTQHDRRTFTVDLTIYNTSMMVFTVTGLFKELNDETNNPASMELYDVRHFARTYVVVPQNNG 519
Fly 520 -FCIRNETIFITNATHEQVREFK 541 |
| Gene | Sequence | Domain | Region | External ID | Identity |
|---|---|---|---|---|---|
| sbr | NP_524660.1 | Tap-RNA_bind | 112..191 | CDD:286271 | |
| leucine-rich repeat | 215..255 | CDD:275382 | 8/39 (21%) | ||
| LRR_RI | <223..341 | CDD:238064 | 21/120 (18%) | ||
| LRR_8 | 256..315 | CDD:290566 | 10/58 (17%) | ||
| LRR_4 | 256..298 | CDD:289563 | 8/41 (20%) | ||
| leucine-rich repeat | 256..281 | CDD:275382 | 1/24 (4%) | ||
| leucine-rich repeat | 282..305 | CDD:275382 | 9/22 (41%) | ||
| leucine-rich repeat | 306..336 | CDD:275382 | 3/29 (10%) | ||
| NTF2 | 372..531 | CDD:238403 | 47/179 (26%) | ||
| Big_3_5 | <578..>614 | CDD:293246 | |||
| TAP_C | 609..671 | CDD:197882 | |||
| nxf-2 | NP_506568.2 | leucine-rich repeat | 55..97 | CDD:275382 | 8/39 (21%) |
| leucine-rich repeat | 98..123 | CDD:275382 | 1/24 (4%) | ||
| leucine-rich repeat | 124..147 | CDD:275382 | 9/22 (41%) | ||
| leucine-rich repeat | 148..178 | CDD:275382 | 3/29 (10%) | ||
| Blue background indicates that the domain is not in the aligned region. | |||||
| Tool | Simple Score | Weighted Score | Original Tool Information | |||
|---|---|---|---|---|---|---|
| BLAST Result | Score | Score Type | Cluster ID | |||
| Compara | 0 | 0.000 | Not matched by this tool. | |||
| Domainoid | 0 | 0.000 | Not matched by this tool. | |||
| eggNOG | 1 | 0.900 | - | - | E1_KOG3763 | |
| Hieranoid | 1 | 1.000 | - | - | ||
| Homologene | 1 | 1.000 | - | - | H38176 | |
| Inparanoid | 1 | 1.050 | 117 | 1.000 | Inparanoid score | I3370 |
| Isobase | 0 | 0.000 | Not matched by this tool. | |||
| OMA | 0 | 0.000 | Not matched by this tool. | |||
| OrthoDB | 1 | 1.010 | - | - | D1051093at2759 | |
| OrthoFinder | 1 | 1.000 | - | - | FOG0000862 | |
| OrthoInspector | 1 | 1.000 | - | - | otm14803 | |
| orthoMCL | 1 | 0.900 | - | - | OOG6_102057 | |
| Panther | 1 | 1.100 | - | - | LDO | PTHR10662 |
| Phylome | 1 | 0.910 | - | - | ||
| RoundUp | 1 | 1.030 | - | avgDist | Average_Evolutionary_Distance | R710 |
| SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
| SwiftOrtho | 0 | 0.000 | Not matched by this tool. | |||
| TreeFam | 0 | 0.000 | Not matched by this tool. | |||
| 11 | 10.900 | |||||