DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment or and APS1

DIOPT Version :9

Sequence 1:NP_536793.1 Gene:or / 43943 FlyBaseID:FBgn0003008 Length:191 Species:Drosophila melanogaster
Sequence 2:NP_013271.1 Gene:APS1 / 850868 SGDID:S000004160 Length:156 Species:Saccharomyces cerevisiae


Alignment Length:142 Identity:46/142 - (32%)
Similarity:84/142 - (59%) Gaps:8/142 - (5%)


- Green bases have known domain annotations that are detailed below.


  Fly     2 IKAILVFNNHGKPRLSKFYQYFDESLQQQIIKETFQLVSKRDDNVCNFLEGGSLIGGSDYKLIYR 66
            :|.:|:.:..||.||.|:|.......:.:|:|:....:..|...:||.:|      .:|:|::|:
Yeast     4 LKYLLLVSRQGKIRLKKWYTAMSAGEKAKIVKDLTPTILARKPKMCNIIE------YNDHKVVYK 62

  Fly    67 HYATLYFVF-CVDSSESELGILDLIQVFVETLDKCFENVCELDLIFHADAVHHILSELVM-GGMV 129
            .||:|||:. .....::||..|::|..||||:|..|.||||||:||:...|:.||:|::| .|.:
Yeast    63 RYASLYFIVGMTPDVDNELLTLEIIHRFVETMDTYFGNVCELDIIFNFSKVYDILNEMIMCDGSI 127

  Fly   130 LQTNMNDIMARI 141
            .:::..:::..:
Yeast   128 AESSRKEVLHHV 139

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
orNP_536793.1 AP3_sigma 1..146 CDD:341438 46/142 (32%)
APS1NP_013271.1 AP1_sigma 5..149 CDD:341435 46/141 (33%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG5030
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 1 1.010 - - QHG53551
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
32.820

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