DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment or and AT2G19790

DIOPT Version :9

Sequence 1:NP_536793.1 Gene:or / 43943 FlyBaseID:FBgn0003008 Length:191 Species:Drosophila melanogaster
Sequence 2:NP_179569.1 Gene:AT2G19790 / 816498 AraportID:AT2G19790 Length:143 Species:Arabidopsis thaliana


Alignment Length:149 Identity:55/149 - (36%)
Similarity:96/149 - (64%) Gaps:14/149 - (9%)


- Green bases have known domain annotations that are detailed below.


  Fly     2 IKAILVFNNHGKPRLSKFYQYFD----ESLQQQIIKETFQLVSKRDDNVCNFLEGGSLIGGSDYK 62
            |:.||:.|..|:.||:::|::..    .:|:.:|:::..    .|:|..|:|:|      ..:||
plant     3 IRFILMVNKQGQTRLAQYYEWLTLEERRALEGEIVRKCL----ARNDQQCSFVE------HRNYK 57

  Fly    63 LIYRHYATLYFVFCVDSSESELGILDLIQVFVETLDKCFENVCELDLIFHADAVHHILSELVMGG 127
            ::||.||:|:|:..||..|:||.||:.|.:.|||:||.|.||||||::||.:..|.:|.|:||.|
plant    58 IVYRRYASLFFMVGVDDDENELAILEFIHLLVETMDKHFGNVCELDIMFHLEKAHFMLEEMVMNG 122

  Fly   128 MVLQTNMNDIMARIEEQNK 146
            .:::|:..:|::.|:..:|
plant   123 CIVETSKANILSPIQLMDK 141

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
orNP_536793.1 AP3_sigma 1..146 CDD:341438 54/147 (37%)
AT2G19790NP_179569.1 AP4_sigma 4..141 CDD:341436 53/146 (36%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG5030
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 1 1.010 - - QHG53551
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
32.820

Return to query results.
Submit another query.