DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment or and ap1s2

DIOPT Version :10

Sequence 1:NP_536793.1 Gene:or / 43943 FlyBaseID:FBgn0003008 Length:191 Species:Drosophila melanogaster
Sequence 2:NP_991121.1 Gene:ap1s2 / 327237 ZFINID:ZDB-GENE-030131-5448 Length:157 Species:Danio rerio


Alignment Length:148 Identity:55/148 - (37%)
Similarity:94/148 - (63%) Gaps:7/148 - (4%)


- Green bases have known domain annotations that are detailed below.


  Fly     5 ILVFNNHGKPRLSKFYQYFDESLQQQIIKETFQLVSKRDDNVCNFLEGGSLIGGSDYKLIYRHYA 69
            :|:|:..||.||.|:|....::.:::|.:|..|:|..|...:|:|||      ..|.|::|:.||
Zfish     4 MLLFSRQGKLRLQKWYVPLSDTQKKKISREVIQMVLARKPKMCSFLE------WRDLKIVYKRYA 62

  Fly    70 TLYFVFCVDSSESELGILDLIQVFVETLDKCFENVCELDLIFHADAVHHILSELVMGGMVLQTNM 134
            :|||...|:..|:||..|::|..:||.|||.|.:|||||:||:.:..::||.|.::||...:|:.
Zfish    63 SLYFCCAVEDQENELITLEIIHRYVELLDKYFGSVCELDIIFNFEKAYYILDEFILGGEAQETSK 127

  Fly   135 NDIMARIEEQNKIVKQEA 152
            .:::..| ||..::::||
Zfish   128 KNVLKAI-EQADMLQEEA 144

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
orNP_536793.1 AP3_sigma 1..146 CDD:341438 53/140 (38%)
ap1s2NP_991121.1 AP1_sigma 2..144 CDD:341435 53/146 (36%)

Return to query results.
Submit another query.