DRSC/TRiP Functional Genomics Resources

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Protein Alignment or and AP-2sigma

DIOPT Version :10

Sequence 1:NP_536793.1 Gene:or / 43943 FlyBaseID:FBgn0003008 Length:191 Species:Drosophila melanogaster
Sequence 2:XP_321389.2 Gene:AP-2sigma / 1281473 VectorBaseID:AGAMI1_014070 Length:142 Species:Anopheles gambiae


Alignment Length:150 Identity:57/150 - (38%)
Similarity:91/150 - (60%) Gaps:16/150 - (10%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MIKAILVFNNHGKPRLSKFYQYFDESLQQQIIKETFQLVSKRDDNVCNFLEGGSLIGGSDYKLIY 65
            ||:.||:.|..||.||:|:|..||:..:|::|:|...:|:.||....||:|      ..::|::|
Mosquito     1 MIRFILIQNRAGKTRLAKWYMNFDDDEKQKLIEEVHAVVTVRDAKHTNFVE------FRNFKIVY 59

  Fly    66 RHYATLYFVFCVDSSESELGILDLIQVFVETLDKCFENVCELDLIFHADAVHHILSELVMGGMVL 130
            |.||.|||..|||.:::.|..|:.|..|||.|::.|.|||||||:|:...|:.::.|:.:.|.:.
Mosquito    60 RRYAGLYFCICVDVNDNNLCYLEAIHNFVEVLNEYFHNVCELDLVFNFYKVYTVVDEMFLAGEIR 124

  Fly   131 QTNMNDIMARIEEQNKIVKQ 150
            :|:          |.|::||
Mosquito   125 ETS----------QTKVLKQ 134

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
orNP_536793.1 AP3_sigma 1..146 CDD:341438 54/144 (38%)
AP-2sigmaXP_321389.2 AP2_sigma 1..141 CDD:341437 56/149 (38%)

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