DRSC/TRiP Functional Genomics Resources

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Protein Alignment or and Ap3s1

DIOPT Version :9

Sequence 1:NP_536793.1 Gene:or / 43943 FlyBaseID:FBgn0003008 Length:191 Species:Drosophila melanogaster
Sequence 2:XP_036016836.1 Gene:Ap3s1 / 11777 MGIID:1337062 Length:209 Species:Mus musculus


Alignment Length:206 Identity:147/206 - (71%)
Similarity:167/206 - (81%) Gaps:23/206 - (11%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MIKAILVFNNHGKPRLSKFYQYFDESLQQQIIKETFQLVSKRDDNVCNFLEGGSLIGGSDYKLIY 65
            ||||||:||||||||||||||.:.|..|||||:|||.||||||:|||||||||.||||||.||||
Mouse     1 MIKAILIFNNHGKPRLSKFYQPYSEDTQQQIIRETFHLVSKRDENVCNFLEGGLLIGGSDNKLIY 65

  Fly    66 RHYATLYFVFCVDSSESELGILDLIQVFVETLDKCFENVCELDLIFHADAVHHILSELVMGGMVL 130
            |||||||||||||||||||||||||||||||||||||||||||||||.|.||:||:|:|||||||
Mouse    66 RHYATLYFVFCVDSSESELGILDLIQVFVETLDKCFENVCELDLIFHVDKVHNILAEMVMGGMVL 130

  Fly   131 QTNMNDIMARIEEQNKIVKQE----------------AGISAAPARAVSAVKSMNIPQ-----QI 174
            :||||:|:.:|:.|||:.|.|                ||::.||||||||||:||:|:     .|
Mouse   131 ETNMNEIVTQIDAQNKLEKSEQIVYTGLFCISQDFSQAGLAGAPARAVSAVKNMNLPEIPRNINI 195

  Fly   175 KD--IKLPDLP 183
            .|  ||:|:||
Mouse   196 GDISIKVPNLP 206

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
orNP_536793.1 AP3_sigma 1..146 CDD:341438 121/144 (84%)
Ap3s1XP_036016836.1 AP3_sigma 1..146 CDD:341438 121/144 (84%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C167838122
Domainoid 1 1.000 44 1.000 Domainoid score I12239
eggNOG 1 0.900 - - E1_COG5030
Hieranoid 1 1.000 - -
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 297 1.000 Inparanoid score I2703
Isobase 00.000 Not matched by this tool.
OMA 1 1.010 - - QHG53551
OrthoDB 1 1.010 - - D1458249at2759
OrthoFinder 1 1.000 - - FOG0002758
OrthoInspector 1 1.000 - - otm42403
orthoMCL 1 0.900 - - OOG6_102376
Panther 1 1.100 - - O PTHR11753
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R65
SonicParanoid 1 1.000 - - X1844
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 1 0.960 - -
1514.800

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