DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment or and Ap1s1

DIOPT Version :9

Sequence 1:NP_536793.1 Gene:or / 43943 FlyBaseID:FBgn0003008 Length:191 Species:Drosophila melanogaster
Sequence 2:XP_036020638.1 Gene:Ap1s1 / 11769 MGIID:1098244 Length:191 Species:Mus musculus


Alignment Length:163 Identity:56/163 - (34%)
Similarity:95/163 - (58%) Gaps:15/163 - (9%)


- Green bases have known domain annotations that are detailed below.


  Fly     2 IKAILVFNNHGKPRLSKFYQYFDESLQQQIIKETFQLVSKRDDNVCNFLEGGSLIGGSDYKLIYR 66
            ::.:|:|:..||.||.|:|....:..::::::|..|:|..|...:|:|||      ..|.|::|:
Mouse    35 MRFMLLFSRQGKLRLQKWYLATSDKERKKMVRELMQVVLARKPKMCSFLE------WRDLKVVYK 93

  Fly    67 HYATLYFVFCVDSSESELGILDLIQVFVETLDKCFENVCELDLIFHADAVHHILSELVMGGMVLQ 131
            .||:|||...::..::||..|:||..:||.|||.|.:|||||:||:.:..:.||.|.:|||.|..
Mouse    94 RYASLYFCCAIEGQDNELITLELIHRYVELLDKYFGSVCELDIIFNFEKAYFILDEFLMGGDVQD 158

  Fly   132 TNMNDIMARIE---------EQNKIVKQEAGIS 155
            |:...::..||         |..:.|.:|.|::
Mouse   159 TSKKSVLKAIEQADLLQEEDESPRSVLEEMGLA 191

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
orNP_536793.1 AP3_sigma 1..146 CDD:341438 53/152 (35%)
Ap1s1XP_036020638.1 AP1_sigma 36..178 CDD:341435 52/147 (35%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG5030
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 1 1.010 - - QHG53551
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
43.820

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