DRSC/TRiP Functional Genomics Resources

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Protein Alignment cl and Nxnl1

DIOPT Version :9

Sequence 1:NP_001260098.1 Gene:cl / 43938 FlyBaseID:FBgn0000318 Length:126 Species:Drosophila melanogaster
Sequence 2:NP_001258270.1 Gene:Nxnl1 / 306342 RGDID:1308296 Length:217 Species:Rattus norvegicus


Alignment Length:108 Identity:28/108 - (25%)
Similarity:38/108 - (35%) Gaps:27/108 - (25%)


- Green bases have known domain annotations that are detailed below.


  Fly     2 VVTHNVKGYDEFTKKME---ELENGDEPVHVLFSGGKDEKGESWCPYCVKAEPVIHD-------- 55
            ::..|....||...:.|   .|||  ..|.:.|..|.       ||.|....||:.|        
  Rat     9 ILIRNNSDQDEVETEAELSRRLEN--RLVLLFFGAGA-------CPQCQAFAPVLKDFFVRLTDE 64

  Fly    56 --ALKKAPGNSHFVHVDVGERAYWKDLNCPFRKDPNTHLIFLP 96
              .|:.|.....:|..|..|..  :||   |.:|.....:|||
  Rat    65 FYVLRAAQLALVYVSQDPTEEQ--QDL---FLRDMPEKWLFLP 102

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
clNP_001260098.1 DUF953 6..124 CDD:368751 28/104 (27%)
Nxnl1NP_001258270.1 TryX_like_RdCVF 8..153 CDD:239306 28/108 (26%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1624076at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
11.010

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