DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment cl and trx-3

DIOPT Version :9

Sequence 1:NP_001260098.1 Gene:cl / 43938 FlyBaseID:FBgn0000318 Length:126 Species:Drosophila melanogaster
Sequence 2:NP_500578.2 Gene:trx-3 / 187389 WormBaseID:WBGene00019717 Length:158 Species:Caenorhabditis elegans


Alignment Length:57 Identity:11/57 - (19%)
Similarity:24/57 - (42%) Gaps:8/57 - (14%)


- Green bases have known domain annotations that are detailed below.


  Fly    30 LFSGGKDEKGE--------SWCPYCVKAEPVIHDALKKAPGNSHFVHVDVGERAYWK 78
            :...|:..||:        |||..|.:..|::.:..::....:..:.|.:..|.|.:
 Worm    18 MVDAGEHLKGKIVVLYFSASWCGPCRQFTPIMKELYQQIAATNQPIEVILLSRDYMR 74

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
clNP_001260098.1 DUF953 6..124 CDD:368751 11/57 (19%)
trx-3NP_500578.2 TryX_like_family 11..132 CDD:239262 11/57 (19%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1624076at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
11.010

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