DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment cl and nxnl2

DIOPT Version :9

Sequence 1:NP_001260098.1 Gene:cl / 43938 FlyBaseID:FBgn0000318 Length:126 Species:Drosophila melanogaster
Sequence 2:XP_012826958.1 Gene:nxnl2 / 100486090 XenbaseID:XB-GENE-989344 Length:156 Species:Xenopus tropicalis


Alignment Length:121 Identity:29/121 - (23%)
Similarity:39/121 - (32%) Gaps:49/121 - (40%)


- Green bases have known domain annotations that are detailed below.


  Fly    10 YDEFTKKMEELENGDEPVHVLFSGGKDEKGESWCPYCVKAEPVIHD------------------- 55
            |.|.....|.|:|  :.|.:.||.       .||..|....||:.|                   
 Frog    13 YGERVDPEEALQN--KIVGLYFSA-------RWCSPCRDFTPVLCDFYAELVEESDPPAQFEIVF 68

  Fly    56 -ALKKAPGNS----HFVHVDVGERAYWKDLNCPFRKDPNTH-------LIFLPTLL 99
             :..|:|.:.    |.:|.|      |  |..||. ||..|       :..||.|:
 Frog    69 ISSDKSPEDMVDYIHDMHGD------W--LALPFH-DPYKHELKNKYKITALPKLV 115

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
clNP_001260098.1 DUF953 6..124 CDD:368751 29/121 (24%)
nxnl2XP_012826958.1 TryX_like_family 9..143 CDD:239262 29/121 (24%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1624076at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
11.010

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