DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment cl and txndc17

DIOPT Version :10

Sequence 1:NP_608930.1 Gene:cl / 43938 FlyBaseID:FBgn0000318 Length:126 Species:Drosophila melanogaster
Sequence 2:XP_004911789.1 Gene:txndc17 / 100379744 XenbaseID:XB-GENE-983479 Length:123 Species:Xenopus tropicalis


Alignment Length:119 Identity:55/119 - (46%)
Similarity:75/119 - (63%) Gaps:4/119 - (3%)


- Green bases have known domain annotations that are detailed below.


  Fly     7 VKGYDEFTKKMEELENGDEPVHVLFSGGKDEKGESWCPYCVKAEPVIHDALKKAPGNSHFVHVDV 71
            |:||:||.:.::  ::..:.|...|||.|:|:|.||||.|||||||:...||..|..|.|::..|
 Frog     9 VQGYEEFCEALK--KHKGKQVFAYFSGNKNEQGVSWCPDCVKAEPVVRGELKNLPEGSVFIYCQV 71

  Fly    72 GERAYWKDLNCPFRKDPNTHLIFLPTLLRWKRPQRLDGERCSNQDLVEMMFEDE 125
            |||.||||....|::  |..|..:||||:...||:|..|.|.|.|||.|||.::
 Frog    72 GERPYWKDPKNEFKE--NLKLTGVPTLLKCGTPQKLVEEECLNTDLVNMMFTED 123

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
clNP_608930.1 DUF953 6..124 CDD:399247 55/116 (47%)
txndc17XP_004911789.1 TRP14_like 6..121 CDD:239250 54/115 (47%)

Return to query results.
Submit another query.