DRSC/TRiP Functional Genomics Resources

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Protein Alignment Men-b and NADP-ME4

DIOPT Version :9

Sequence 1:NP_001163750.1 Gene:Men-b / 43936 FlyBaseID:FBgn0029155 Length:624 Species:Drosophila melanogaster
Sequence 2:NP_178093.1 Gene:NADP-ME4 / 844314 AraportID:AT1G79750 Length:646 Species:Arabidopsis thaliana


Alignment Length:589 Identity:282/589 - (47%)
Similarity:385/589 - (65%) Gaps:18/589 - (3%)


- Green bases have known domain annotations that are detailed below.


  Fly    19 TSATGKTAV---AAATVP---TARHYHEVVGD-------IICP---SQVRGIDHIRDPRLNKGLA 67
            |:||..:::   ||..||   .:....:|.|:       .|.|   |...|...:|||..|||||
plant    57 TTATSSSSLETSAADIVPKSTVSGGVQDVYGEDAATEDMPITPWSLSVASGYTLLRDPHHNKGLA 121

  Fly    68 FTLEERQTLGIHGLQPARFKTQEEQLQLCKIAVNRYTEPLNKYLYLSDLYDRNERLFFRFLSENI 132
            |:..||....:.||.|....:|:.|::.....:.:|..||.||:.:.||.:.|||||::.|.:::
plant   122 FSHRERDAHYLRGLLPPTVISQDLQVKKIMHTLRQYQVPLQKYMAMMDLQETNERLFYKLLIDHV 186

  Fly   133 EDLMPIVYTPTVGLACQRFGLIYRRPHGLFITYNDRGHIFDVMKNWPEPNVRAICVTDGERILGL 197
            |:|:|::||||||.|||::|.|:.||.||||:..::|.|.:|::||||.|::.|.||||||||||
plant   187 EELLPVIYTPTVGEACQKYGSIFLRPQGLFISLKEKGKIHEVLRNWPEKNIQVIVVTDGERILGL 251

  Fly   198 GDLGACGMGIPVGKLALYTALAGIKPHQCLPIVVDVGTNNIDLLEDPLYVGLRQKRVVGREYDEF 262
            ||||..|||||||||:|||||.|::|..|||:.:||||||..||.|..|:||||:|..|.||.|.
plant   252 GDLGCQGMGIPVGKLSLYTALGGVRPSACLPVTIDVGTNNEKLLNDEFYIGLRQRRATGEEYSEL 316

  Fly   263 IDEFMEAVVQRYGQNTLIQFEDFGNHNAFRFLDKYRNTYCTFNDDIQGTASVAVAGLYASKRITG 327
            :.|||.||.|.||:..:||||||.|||||..|.||..|:..|||||||||||.:|||.|:.|..|
plant   317 MHEFMTAVKQNYGEKVVIQFEDFANHNAFDLLAKYGTTHLVFNDDIQGTASVVLAGLIAALRFVG 381

  Fly   328 KSFKDYTFLFAGAGEAAIGIADL-TVKAMVQDGVPIEEAYNRIYMVDIDGLLTKSRKVGNLDGHK 391
            .|..|:.|||.|||||..|||:| .::...:..:|:|||...|::||..||:..||| .::...|
plant   382 GSLSDHRFLFLGAGEAGTGIAELIALEISKKSHIPLEEARKNIWLVDSKGLIVSSRK-ESIQHFK 445

  Fly   392 IHYAKDINPMSDLAEIVSTIKPSVLIGASAAAGIFTPEILRTMADNNERPVVFALSNPTSKAECT 456
            ..:|.|..|:.:|.:.|..|||:||||.|.....||.:::.|||..||:|::.:||||||::|||
plant   446 KPWAHDHEPIRELVDAVKAIKPTVLIGTSGVGQTFTQDVVETMAKLNEKPIILSLSNPTSQSECT 510

  Fly   457 AEDAYKHTDARVIFSSGSPFPPVQIGDKTFYPGQGNNAYIFPGVGLGVICTGTHHIPDEMFLIAA 521
            ||:||..:..|.||:|||||.||:...|||.|||.||||||||.|||:|.:||..:.|:|.|.|:
plant   511 AEEAYTWSQGRAIFASGSPFAPVEYEGKTFVPGQANNAYIFPGFGLGLIMSGTIRVHDDMLLAAS 575

  Fly   522 QELANFVEPSDIERGSLYPPLSSIRNVSMNIAVGVTKCAYDRGLASTYPEPQDKRKWLENQLYNF 586
            :.||..:.....|:|.:|||..:||.:|..||..|...||:.|||:..|:|::..:..|:.:|:.
plant   576 EALAEELMEEHYEKGMIYPPFRNIRKISARIAAKVAAKAYELGLATRLPQPKELEQCAESSMYSP 640

  Fly   587 NYES 590
            :|.|
plant   641 SYRS 644

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Men-bNP_001163750.1 PLN03129 51..590 CDD:215594 269/539 (50%)
malic 117..298 CDD:278802 108/180 (60%)
NAD_bind_1_malic_enz 308..585 CDD:133454 129/277 (47%)
NADP-ME4NP_178093.1 PLN03129 67..646 CDD:215594 279/579 (48%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 1 1.000 263 1.000 Domainoid score I469
eggNOG 1 0.900 - - E1_COG0281
Hieranoid 1 1.000 - -
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 559 1.000 Inparanoid score I249
OMA 1 1.010 - - QHG60768
OrthoDB 1 1.010 - - D435571at2759
OrthoFinder 1 1.000 - - FOG0000475
OrthoInspector 1 1.000 - - mtm1109
orthoMCL 1 0.900 - - OOG6_100205
Panther 1 1.100 - - O PTHR23406
Phylome 1 0.910 - -
SonicParanoid 1 1.000 - - X340
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 1 0.960 - -
1312.840

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