DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Men-b and Me1

DIOPT Version :9

Sequence 1:NP_001163750.1 Gene:Men-b / 43936 FlyBaseID:FBgn0029155 Length:624 Species:Drosophila melanogaster
Sequence 2:NP_032641.2 Gene:Me1 / 17436 MGIID:97043 Length:572 Species:Mus musculus


Alignment Length:570 Identity:316/570 - (55%)
Similarity:395/570 - (69%) Gaps:18/570 - (3%)


- Green bases have known domain annotations that are detailed below.


  Fly    33 PTARHYHEVVGDIICPSQVRGIDHIRDPRLNKGLAFTLEERQTLGIHGLQPARFKTQEEQLQLCK 97
            |..||.|:           ||....|||.|||.|||||||||.|.||||.|....:||  ||:.:
Mouse     6 PRRRHTHQ-----------RGYLLTRDPHLNKDLAFTLEERQQLNIHGLLPPCIISQE--LQVLR 57

  Fly    98 IAVN--RYTEPLNKYLYLSDLYDRNERLFFRFLSENIEDLMPIVYTPTVGLACQRFGLIYRRPHG 160
            |..|  |.....::||.|.||.||||:||:..|..::|..||||||||||||||::.|.:|:|.|
Mouse    58 IIKNFERLNSDFDRYLLLMDLQDRNEKLFYSVLMSDVEKFMPIVYTPTVGLACQQYSLAFRKPRG 122

  Fly   161 LFITYNDRGHIFDVMKNWPEPNVRAICVTDGERILGLGDLGACGMGIPVGKLALYTALAGIKPHQ 225
            |||:.:|:|||..|:..|||..|:||.||||||||||||||..||||||||||||||..|:.|.|
Mouse   123 LFISIHDKGHIASVLNAWPEDVVKAIVVTDGERILGLGDLGCNGMGIPVGKLALYTACGGVNPQQ 187

  Fly   226 CLPIVVDVGTNNIDLLEDPLYVGLRQKRVVGREYDEFIDEFMEAVVQRYGQNTLIQFEDFGNHNA 290
            ||||.:||||.|.:||:||||:|||.:||.|.|||.|:||||||...:||.|.|||||||.|.||
Mouse   188 CLPITLDVGTENEELLKDPLYIGLRHRRVRGPEYDAFLDEFMEAASSKYGMNCLIQFEDFANRNA 252

  Fly   291 FRFLDKYRNTYCTFNDDIQGTASVAVAGLYASKRITGKSFKDYTFLFAGAGEAAIGIADLTVKAM 355
            ||.|:||||.|||||||||||||||||||.|:.|||.....|.|.||.||||||:|||.|.|.||
Mouse   253 FRLLNKYRNKYCTFNDDIQGTASVAVAGLLAALRITKNKLSDQTVLFQGAGEAALGIAHLVVMAM 317

  Fly   356 VQDGVPIEEAYNRIYMVDIDGLLTKSRKVGNLDGHKIHYAKDINPMSDLAEIVSTIKPSVLIGAS 420
            .::|:..|.|..:|::||..||:.|.|  .:|...|..:|.:...|.:|..||..|||:.|||.:
Mouse   318 EKEGLSKENARKKIWLVDSKGLIVKGR--ASLTEEKEVFAHEHEEMKNLEAIVQKIKPTALIGVA 380

  Fly   421 AAAGIFTPEILRTMADNNERPVVFALSNPTSKAECTAEDAYKHTDARVIFSSGSPFPPVQIGD-K 484
            |..|.||.:||:.||..||||::||||||||||||:||..||.|..|.||:|||||.||.:.| :
Mouse   381 AIGGAFTEQILKDMAAFNERPIIFALSNPTSKAECSAEQCYKVTKGRAIFASGSPFDPVTLPDGR 445

  Fly   485 TFYPGQGNNAYIFPGVGLGVICTGTHHIPDEMFLIAAQELANFVEPSDIERGSLYPPLSSIRNVS 549
            |.:||||||:|:||||.|||:..|..||.|::||..|:.::..|....::.|.|||||::||.||
Mouse   446 TLFPGQGNNSYVFPGVALGVVACGLRHIDDKVFLTTAEVISQQVSDKHLQEGRLYPPLNTIRGVS 510

  Fly   550 MNIAVGVTKCAYDRGLASTYPEPQDKRKWLENQLYNFNYESSMPASWVWP 599
            :.|||.:.:.||...:|:.|||||:|.:::.:|:|:.||:..:|..:.||
Mouse   511 LKIAVKIVQDAYKEKMATVYPEPQNKEEFVSSQMYSTNYDQILPDCYPWP 560

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Men-bNP_001163750.1 PLN03129 51..590 CDD:215594 309/541 (57%)
malic 117..298 CDD:278802 119/180 (66%)
NAD_bind_1_malic_enz 308..585 CDD:133454 142/277 (51%)
Me1NP_032641.2 PLN03129 2..551 CDD:215594 313/559 (56%)
malic 79..260 CDD:278802 119/180 (66%)
NAD_bind_1_malic_enz 270..547 CDD:133454 143/278 (51%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C167849538
Domainoid 1 1.000 269 1.000 Domainoid score I1830
eggNOG 1 0.900 - - E1_COG0281
Hieranoid 1 1.000 - -
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 1 0.950 - 0 Normalized mean entropy S996
OMA 1 1.010 - - QHG60768
OrthoDB 1 1.010 - - D334471at33208
OrthoFinder 1 1.000 - - FOG0000475
OrthoInspector 1 1.000 - - mtm8876
orthoMCL 1 0.900 - - OOG6_100205
Panther 1 1.100 - - LDO PTHR23406
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R2182
SonicParanoid 1 1.000 - - X340
SwiftOrtho 1 1.000 - -
TreeFam 1 0.960 - -
1615.700

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