DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Men-b and Me2

DIOPT Version :9

Sequence 1:NP_001163750.1 Gene:Men-b / 43936 FlyBaseID:FBgn0029155 Length:624 Species:Drosophila melanogaster
Sequence 2:XP_006525559.1 Gene:Me2 / 107029 MGIID:2147351 Length:596 Species:Mus musculus


Alignment Length:594 Identity:301/594 - (50%)
Similarity:412/594 - (69%) Gaps:23/594 - (3%)


- Green bases have known domain annotations that are detailed below.


  Fly    29 AATVP---TARHYHEVVGDIICPSQVRGIDHIRDPRLNKGLAFTLEERQTLGIHGLQPARFKTQE 90
            |.|.|   |.|..|         .:.:|...:.:||.|||:||||:|||.||:.||.|.:.:||:
Mouse    14 AVTTPCTLTCRRVH---------LKEKGKPLMLNPRTNKGMAFTLQERQMLGLQGLLPPKIETQD 69

  Fly    91 EQLQLCKIAVNRYTEPLNKYLYLSDLYDRNERLFFRFLSENIEDLMPIVYTPTVGLACQRFGLIY 155
            .|.......:.:.|.||.||:|:..:.:|||:||:|.|.::||.||||||||||||||.::|.|:
Mouse    70 IQALRFHRNLKKMTSPLEKYIYIMGIQERNEKLFYRILQDDIESLMPIVYTPTVGLACCQYGHIF 134

  Fly   156 RRPHGLFITYNDRGHIFDVMKNWPEPNVRAICVTDGERILGLGDLGACGMGIPVGKLALYTALAG 220
            |||.||||:.:||||:..::.||||.:|:|:.||||||||||||||..|||||||||.||||.||
Mouse   135 RRPKGLFISISDRGHVRSIVDNWPENHVKAVVVTDGERILGLGDLGVYGMGIPVGKLCLYTACAG 199

  Fly   221 IKPHQCLPIVVDVGTNNIDLLEDPLYVGLRQKRVVGREYDEFIDEFMEAVVQRYGQNTLIQFEDF 285
            |:|.:|||:.:||||:|:.||:||.|:||.|||...:.||:.:||||:|:..|||:|||||||||
Mouse   200 IQPEKCLPVCIDVGTDNMALLKDPFYMGLYQKRDRSQLYDDLMDEFMKAITDRYGRNTLIQFEDF 264

  Fly   286 GNHNAFRFLDKYRNTYCTFNDDIQGTASVAVAGLYASKRITGKSFKDYTFLFAGAGEAAIGIADL 350
            |||||||||.||:..||||||||||||:||::||.|::|:..|...::..||.||||||:|||:|
Mouse   265 GNHNAFRFLRKYQQKYCTFNDDIQGTAAVALSGLLAAQRVINKPVSEHKILFLGAGEAALGIANL 329

  Fly   351 TVKAMVQDGVPIEEAYNRIYMVDIDGLLTKSRKVGNLDGHK---IHYAKDINPMSDLAEIVSTIK 412
            .|.:||:.|:..|||..:|:|.|..|||.|.| ..::|.::   .|.|.:..| :...:.|:.:|
Mouse   330 IVLSMVESGLSEEEAQRKIWMFDKSGLLVKGR-TASIDSNQEPYAHAAPESIP-ATFEDAVNKLK 392

  Fly   413 PSVLIGASAAAGIFTPEILRTMADNNERPVVFALSNPTSKAECTAEDAYKHTDARVIFSSGSPFP 477
            |||:||.:.|..:||..:::.||..||||::|||||||::|||||||||..|:.|.:|:|||||.
Mouse   393 PSVIIGVAGAGPLFTHGVIKAMASINERPIIFALSNPTAQAECTAEDAYTLTEGRCLFASGSPFE 457

  Fly   478 PVQIGD-KTFYPGQGNNAYIFPGVGLGVICTGTHHIPDEMFLIAAQELANFVEPSDIERGSLYPP 541
            ||::.| :.|.|||||||||||||.|.||.....||.|.:||.||:.|...:..:::.:|.|||.
Mouse   458 PVKLQDGRVFTPGQGNNAYIFPGVALAVILCEARHISDTVFLEAAKALTTQLTDAELAQGRLYPS 522

  Fly   542 LSSIRNVSMNIAVGVTKCAYDRGLASTYPEPQDKRKWLENQLYNFNYESSMPASWVWPRM----P 602
            |::|:.||.|||:.:.:..|...:|..||||:||.:::..:::..||.|.:|..:.||..    |
Mouse   523 LANIQEVSANIAIKLAEYLYANKMAFRYPEPEDKARYVRERIWRSNYVSLLPDVYDWPESSLTPP 587

  Fly   603 YIKTRDLVP 611
            .| |.:.:|
Mouse   588 QI-TEEKLP 595

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Men-bNP_001163750.1 PLN03129 51..590 CDD:215594 287/542 (53%)
malic 117..298 CDD:278802 120/180 (67%)
NAD_bind_1_malic_enz 308..585 CDD:133454 130/280 (46%)
Me2XP_006525559.1 PLN03129 35..573 CDD:215594 287/539 (53%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C167849528
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG0281
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 1 1.010 - - QHG60768
OrthoDB 1 1.010 - - D334471at33208
OrthoFinder 1 1.000 - - FOG0000475
OrthoInspector 1 1.000 - - mtm8876
orthoMCL 1 0.900 - - OOG6_100205
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R2182
SonicParanoid 1 1.000 - - X340
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 1 0.960 - -
1110.650

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