DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Men-b and me1

DIOPT Version :9

Sequence 1:NP_001163750.1 Gene:Men-b / 43936 FlyBaseID:FBgn0029155 Length:624 Species:Drosophila melanogaster
Sequence 2:XP_002938500.1 Gene:me1 / 100489590 XenbaseID:XB-GENE-1013221 Length:589 Species:Xenopus tropicalis


Alignment Length:567 Identity:315/567 - (55%)
Similarity:406/567 - (71%) Gaps:17/567 - (2%)


- Green bases have known domain annotations that are detailed below.


  Fly    37 HYHEVVGDIICPSQVRGIDHIRDPRLNKGLAFTLEERQTLGIHGLQPARFKTQEEQLQLCKIAVN 101
            ||          ::.||.|..|||.||||:||:||||..||||||.|..|.:|:  :|:.::..|
 Frog    27 HY----------TKKRGYDITRDPHLNKGMAFSLEERLQLGIHGLLPPCFLSQD--VQVLRVLRN 79

  Fly   102 --RYTEPLNKYLYLSDLYDRNERLFFRFLSENIEDLMPIVYTPTVGLACQRFGLIYRRPHGLFIT 164
              |....|::|:.|..|.||||:||::.|:.:||..||:|||||||||||::||.:|||.|||||
 Frog    80 YERQKCDLDRYILLMGLQDRNEKLFYKVLTSDIERFMPVVYTPTVGLACQQYGLAFRRPRGLFIT 144

  Fly   165 YNDRGHIFDVMKNWPEPNVRAICVTDGERILGLGDLGACGMGIPVGKLALYTALAGIKPHQCLPI 229
            .:|||||..|||:|||.|::|:.||||||||||||||:.||||||||||||||..|::|.:|||:
 Frog   145 IHDRGHISTVMKSWPEDNIKAVVVTDGERILGLGDLGSYGMGIPVGKLALYTACGGVQPQECLPV 209

  Fly   230 VVDVGTNNIDLLEDPLYVGLRQKRVVGREYDEFIDEFMEAVVQRYGQNTLIQFEDFGNHNAFRFL 294
            ::||||:|.:||.||||:|||.:||.|:||||.:||||:||.:|||.|.|||||||.|.||||.|
 Frog   210 MLDVGTDNQELLNDPLYIGLRHRRVRGKEYDELVDEFMKAVTERYGINCLIQFEDFANANAFRLL 274

  Fly   295 DKYRNTYCTFNDDIQGTASVAVAGLYASKRITGKSFKDYTFLFAGAGEAAIGIADLTVKAMVQDG 359
            :.|||.||||||||||||:||||||..:.|||.....|:|.||.||||||:|||||.|.||.::|
 Frog   275 NMYRNKYCTFNDDIQGTAAVAVAGLLGALRITKNKLSDHTVLFQGAGEAAMGIADLIVMAMEKEG 339

  Fly   360 VPIEEAYNRIYMVDIDGLLTKSRKVGNLDGHKIHYAKDINPMSDLAEIVSTIKPSVLIGASAAAG 424
            .|.:.|...|:|||..||:.|.|  .:|:..|..:|.....|..|.|:|..|||:||||.:|..|
 Frog   340 TPRDAAIKNIWMVDSKGLIVKGR--ASLNHEKERFAHPHKEMKSLEEVVKDIKPTVLIGVAAIGG 402

  Fly   425 IFTPEILRTMADNNERPVVFALSNPTSKAECTAEDAYKHTDARVIFSSGSPFPPVQIGD-KTFYP 488
            .||.:|::.||..|.||::|||||||||||||||..|:.|..|.||:|||||.||.:.| :|.||
 Frog   403 AFTEQIIKDMASFNNRPIIFALSNPTSKAECTAEQCYRLTQGRGIFASGSPFDPVTLPDGRTLYP 467

  Fly   489 GQGNNAYIFPGVGLGVICTGTHHIPDEMFLIAAQELANFVEPSDIERGSLYPPLSSIRNVSMNIA 553
            |||||||:||||.|||:..|..||.|::||..|:.:|..|....:|.|.|||||.:|:.||:.||
 Frog   468 GQGNNAYVFPGVALGVVACGVRHISDDVFLTTAEIIAQQVSDKHLEEGRLYPPLQTIQEVSVKIA 532

  Fly   554 VGVTKCAYDRGLASTYPEPQDKRKWLENQLYNFNYESSMPASWVWPR 600
            |.:.:.||....||.:|||::|..::.:|:|:.:|:..|..|:.||:
 Frog   533 VKIVENAYKDNSASVFPEPENKEAFVRSQMYSTDYDQFMVDSYSWPQ 579

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Men-bNP_001163750.1 PLN03129 51..590 CDD:215594 309/541 (57%)
malic 117..298 CDD:278802 122/180 (68%)
NAD_bind_1_malic_enz 308..585 CDD:133454 143/277 (52%)
me1XP_002938500.1 PLN03129 31..571 CDD:215594 309/543 (57%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 273 1.000 Domainoid score I1752
eggNOG 00.000 Not matched by this tool.
Hieranoid 1 1.000 - -
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 630 1.000 Inparanoid score I836
OMA 1 1.010 - - QHG60768
OrthoDB 1 1.010 - - D334471at33208
OrthoFinder 1 1.000 - - FOG0000475
OrthoInspector 1 1.000 - - mtm9538
Panther 1 1.100 - - LDO PTHR23406
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X340
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
1010.080

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