DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Men-b and me3

DIOPT Version :9

Sequence 1:NP_001163750.1 Gene:Men-b / 43936 FlyBaseID:FBgn0029155 Length:624 Species:Drosophila melanogaster
Sequence 2:XP_031751513.1 Gene:me3 / 100135099 XenbaseID:XB-GENE-973120 Length:624 Species:Xenopus tropicalis


Alignment Length:596 Identity:321/596 - (53%)
Similarity:413/596 - (69%) Gaps:8/596 - (1%)


- Green bases have known domain annotations that are detailed below.


  Fly    10 TVGKLCRCGTSATGKTA-VAAATVPTARHYHEVV--GDIICPSQV--RGIDHIRDPRLNKGLAFT 69
            :||.....|.:..|..| |.:...|:.|..|...  |..:.|..:  ||.|..|:|.||||:|||
 Frog    22 SVGLRAASGAARLGLWAPVLSHAQPSIRVCHTAAGGGTPVKPQAIKKRGYDITRNPYLNKGMAFT 86

  Fly    70 LEERQTLGIHGLQPARFKTQEEQLQLCKIAVNRYTEPLNKYLYLSDLYDRNERLFFRFLSENIED 134
            ||||..||||||.|..|.:|:.|:.....:....:..|:||:.|..|.||||:||:|.|:.:||.
 Frog    87 LEERLQLGIHGLLPPCFLSQDVQVLRVMKSYETKSSDLDKYIILMTLQDRNEKLFYRVLTSDIER 151

  Fly   135 LMPIVYTPTVGLACQRFGLIYRRPHGLFITYNDRGHIFDVMKNWPEPNVRAICVTDGERILGLGD 199
            .||||||||||||||::||.:|||.|||||.:|:|||..::.:|||.:::||.||||||||||||
 Frog   152 FMPIVYTPTVGLACQQYGLAFRRPRGLFITIHDKGHIATMLNSWPEEDIKAIVVTDGERILGLGD 216

  Fly   200 LGACGMGIPVGKLALYTALAGIKPHQCLPIVVDVGTNNIDLLEDPLYVGLRQKRVVGREYDEFID 264
            ||..||||||||||||||..|:.|.||||:::||||:|..||.||||:||:.|||.|::|||.||
 Frog   217 LGGYGMGIPVGKLALYTACGGVHPQQCLPVLLDVGTDNEALLNDPLYIGLKHKRVRGKQYDELID 281

  Fly   265 EFMEAVVQRYGQNTLIQFEDFGNHNAFRFLDKYRNTYCTFNDDIQGTASVAVAGLYASKRITGKS 329
            |||:||..:||.|.|||||||.|.||||.|:||||.||||||||||||||||||:.|:.|||...
 Frog   282 EFMQAVTNKYGMNCLIQFEDFANSNAFRLLNKYRNKYCTFNDDIQGTASVAVAGILAALRITNNR 346

  Fly   330 FKDYTFLFAGAGEAAIGIADLTVKAMVQDGVPIEEAYNRIYMVDIDGLLTKSRKVGNLDGHKIHY 394
            ..|:.|:|.||||||:|||.|...||.::|...|:|..:|:|||..||:.|.|  |||:..|..:
 Frog   347 LSDHKFVFQGAGEAAMGIAQLITMAMEKEGTSREDAIKKIWMVDSKGLIVKGR--GNLNHEKDVF 409

  Fly   395 AKDINPMSDLAEIVSTIKPSVLIGASAAAGIFTPEILRTMADNNERPVVFALSNPTSKAECTAED 459
            |.|...:..|.|.|..:||:.:||.:|..|.||.:|::.||..|:||::|||||||||||||||.
 Frog   410 AHDHPQVKTLEEAVQILKPTAIIGVAAIGGAFTEKIIKDMAAFNKRPIIFALSNPTSKAECTAEQ 474

  Fly   460 AYKHTDARVIFSSGSPFPPVQIGD-KTFYPGQGNNAYIFPGVGLGVICTGTHHIPDEMFLIAAQE 523
            .|:.|:.|.||:|||||..|.:.: :|||||||||||:||||.||||..|..||.:::||..|:.
 Frog   475 CYQLTEGRGIFASGSPFSKVTLANGQTFYPGQGNNAYVFPGVALGVIGCGVRHISEDLFLTTAET 539

  Fly   524 LANFVEPSDIERGSLYPPLSSIRNVSMNIAVGVTKCAYDRGLASTYPEPQDKRKWLENQLYNFNY 588
            :|..|...::..|.|||||||||:||..|||.:...||...:||.||||:||..::.:.:|:.:|
 Frog   540 IAEMVTAENLAEGRLYPPLSSIRDVSFKIAVKIVDYAYKNNMASWYPEPEDKESFVRSLIYSPDY 604

  Fly   589 ESSMPASWVWP 599
            :|....|:.||
 Frog   605 DSFTIDSYNWP 615

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Men-bNP_001163750.1 PLN03129 51..590 CDD:215594 306/541 (57%)
malic 117..298 CDD:278802 121/180 (67%)
NAD_bind_1_malic_enz 308..585 CDD:133454 142/277 (51%)
me3XP_031751513.1 PLN03129 29..608 CDD:215594 316/580 (54%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 273 1.000 Domainoid score I1752
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 1 1.000 - - H100773
Inparanoid 1 1.050 630 1.000 Inparanoid score I836
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D334471at33208
OrthoFinder 1 1.000 - - FOG0000475
OrthoInspector 1 1.000 - - mtm9538
Panther 1 1.100 - - O PTHR23406
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X340
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
88.160

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