Sequence 1: | NP_651958.2 | Gene: | NtR / 43935 | FlyBaseID: | FBgn0029147 | Length: | 585 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | NP_476532.2 | Gene: | Chrna6 / 81721 | RGDID: | 69281 | Length: | 493 | Species: | Rattus norvegicus |
Alignment Length: | 390 | Identity: | 87/390 - (22%) |
---|---|---|---|
Similarity: | 154/390 - (39%) | Gaps: | 45/390 - (11%) |
- Green bases have known domain annotations that are detailed below.
Fly 188 SNTARWFYDCGFDGYGSEIAPIVKEETKTEKLLSHLN---IQAENASMPANLSSISFHFQ---TR 246
Fly 247 SLAYEQTSSLLQTRMHMMMHWRDSRLVWKPEDFGSLESFEHPDLRIWKPHMNVLNGALQSMGQVL 311
Fly 312 QSYELMVYANGSITLYAQNLQLASWCVDSARNWPSERVTCDIELGLNGQEGQENVALIYDDQRKP 376
Fly 377 IAPNEHVNTPSGWSFTQMSVVLVENDSQR-----RYNPKGMMQKMTGDVAIEFTLQRNRSFYMTV 436
Fly 437 FYLPLIACQMFLILSFVLRST--RRSSLILIALLIAAWGLMYMTR-YASPHYVPPMMTAYKVIMM 498
Fly 499 TTTYCYILHICIIWLDLY---PPRSKAPGWLVRVINSNVLRCILGLRFS-DSTDYCDIQENPWHH 559
Fly 560 559 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
NtR | NP_651958.2 | Methyltransf_FA | 90..191 | CDD:289052 | 1/2 (50%) |
Neur_chan_LBD | 212..429 | CDD:280998 | 48/227 (21%) | ||
Chrna6 | NP_476532.2 | LIC | 34..483 | CDD:273305 | 81/366 (22%) |
LGIC_ECD | 34..240 | CDD:355788 | 49/228 (21%) | ||
Cys-loop | 158..172 | CDD:349787 | 2/13 (15%) |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 0 | 0.000 | Not matched by this tool. | |||
Domainoid | 0 | 0.000 | Not matched by this tool. | |||
eggNOG | 1 | 0.900 | - | - | E1_KOG3645 | |
Hieranoid | 0 | 0.000 | Not matched by this tool. | |||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoDB | 0 | 0.000 | Not matched by this tool. | |||
OrthoFinder | 0 | 0.000 | Not matched by this tool. | |||
OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
orthoMCL | 0 | 0.000 | Not matched by this tool. | |||
Panther | 0 | 0.000 | Not matched by this tool. | |||
Phylome | 1 | 0.910 | - | - | ||
SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
SwiftOrtho | 0 | 0.000 | Not matched by this tool. | |||
TreeFam | 0 | 0.000 | Not matched by this tool. | |||
2 | 1.810 |