Protein Alignment NtR and chrnb3a

DIOPT Version :9

• Sequence 1: NP_651958.2
• Gene: NtR / 43935
• FlyBaseID: FBgn0029147
• Length: 585
• Species: Drosophila melanogaster
• Sequence 2: NP_957514.1
• Gene: chrnb3a / 794401
• ZFINID: ZDB-GENE-040108-1
• Length: 467
• Species: Danio rerio
• Alignment Length: 392
• Identity: 76/392 - (19%)
• Similarity: 139/392 - (35%)
• Gaps: 103/392 - (26%)

  Fly   199 FDGYGSEIAPIVKEETKTEKLLSHLNIQAENASMPANLSSISFHFQTRSLA-YEQTSSLLQTRMH 262
            |.||...:.|::           |.|          :..::.|..:...|. .::.:.|:.|.:.
Zfish    40 FRGYQKWVRPVL-----------HAN----------DTITVRFGLKISQLVDVDEKNQLMTTNVW 83

  Fly   263 MMMHWRDSRLVWKPEDFGSLESFEHPDLRIWKPHMNV-------LNGALQSMGQVLQSYELMVYA 320
            :...|.|.:|.|.|||:|.:.|...|...||.|.:.:       ..|:|.:        :.:|..
Zfish    84 LWEEWTDYKLRWNPEDYGGITSIRVPSETIWLPDIVLYENADGRFEGSLMT--------KAIVRF 140

  Fly   321 NGSITLYAQNLQLASWCVDSARNWPSERVTCDIELGLNGQEGQENVALIYDDQRKPIAPNEHVNT 385
            ||:| ::.......|.|......:|.:|..|.::.|
Zfish   141 NGTI-MWTPPASYKSACTMDVTFFPFDRQNCSMKFG----------------------------- 175

  Fly   386 PSGWSF--TQMSVVLVENDSQRR---YNPKGMMQKMTGD-------------VAIEFTLQRNRSF 432
              .|::  |.:.:.||:....|:   .|.:..:...||.             :...|.|:|...|
Zfish   176 --SWTYDGTMVDLTLVDAYVDRKDFFDNGEWEILNATGQRGSRRDGIYSYPYLTYSFILKRLPLF 238

  Fly   433 YMTVFYLPLIACQMFLILSFVLRSTRRSSL-----ILIALLIAAWGLMYMTRYASPHYVPPMMTA 492
            |.....:|.:......:|.|.|.|.....|     :|::|.:  :.|:......|...|.|::..
Zfish   239 YTLFLIIPCLGLSFLTVLVFYLPSDEGEKLSLSTSVLVSLTV--FLLVIEEIIPSSSKVIPLIGE 301

  Fly   493 YKV-IMMTTTYCYILHICIIWLD-----LYPPRSKAPGWLVRVINSNVLRCILGLRFSDSTDYCD 551
            |.: ||:..|:..|:.:.:|.:.     .|.|  .|| |:..:....:.|.:.....:|...|.|
Zfish   302 YLLFIMIFVTFSIIVTVFVINVHHRSSATYHP--MAP-WVKSLFLQRLPRLLCMRGHTDRYQYPD 363

  Fly   552 IQ 553
            |:
Zfish   364 IE 365

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
NtR	NP_651958.2	Methyltransf_FA	90..191	CDD:289052
		Neur_chan_LBD	212..429	CDD:280998	41/242 (17%)
chrnb3a	NP_957514.1	LIC	9..459	CDD:273305	76/392 (19%)
		Neur_chan_LBD	32..236	CDD:280998	46/256 (18%)
		Neur_chan_memb	243..456	CDD:280999	28/128 (22%)

Information from Original Tools

Tool	Simple Score	Weighted Score	Original Tool Information
			BLAST Result	Score	Score Type	Cluster ID
Compara	0	0.000	Not matched by this tool.
Domainoid	0	0.000	Not matched by this tool.
eggNOG	1	0.900	-	-		E1_KOG3645
Hieranoid	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	0	0.000	Not matched by this tool.
OrthoFinder	0	0.000	Not matched by this tool.
OrthoInspector	0	0.000	Not matched by this tool.
orthoMCL	0	0.000	Not matched by this tool.
Panther	0	0.000	Not matched by this tool.
Phylome	1	0.910	-	-
RoundUp	0	0.000	Not matched by this tool.
SonicParanoid	0	0.000	Not matched by this tool.
SwiftOrtho	0	0.000	Not matched by this tool.
TreeFam	0	0.000	Not matched by this tool.
ZFIN	0	0.000	Not matched by this tool.
	2	1.810