Protein Alignment NtR and Chrna9

DIOPT Version :9

• Sequence 1: NP_651958.2
• Gene: NtR / 43935
• FlyBaseID: FBgn0029147
• Length: 585
• Species: Drosophila melanogaster
• Sequence 2: NP_075219.2
• Gene: Chrna9 / 65024
• RGDID: 621534
• Length: 479
• Species: Rattus norvegicus
• Alignment Length: 395
• Identity: 84/395 - (21%)
• Similarity: 145/395 - (36%)
• Gaps: 79/395 - (20%)

  Fly   187 GSNTARWFYDCGFDGYGSEIAPIVKEETKTEKLLSHLNIQAENASMPANLSSISFHFQTRSLAYE 251
            |....:.|.|. |:.|.|.:.|:    ..|:.:|        |.::...||.|.        ..:
  Rat    28 GKYAQKLFSDL-FEDYSSALRPV----EDTDAVL--------NVTLQVTLSQIK--------DMD 71

  Fly   252 QTSSLLQTRMHMMMHWRDSRLVWKPEDFGSLESFEHPDLRIWKPHMNVLNGALQSMGQVLQSYEL 316
            :.:.:|...:.:...|.|:.|.|..:.:..|:|...|...:|:|.:.:.|.|.....:.:.:..:
  Rat    72 ERNQILTAYLWIRQTWHDAYLTWDRDQYDRLDSIRIPSDLVWRPDIVLYNKADDESSEPVNTNVV 136

  Fly   317 MVYANGSITLYAQNLQLASWCVDSARNWPSERVTCDIELG---LNGQEGQENVALIYDDQRKPIA 378
            :.| :|.||..:..:..:| ||.....:|.:...|::..|   .||.:.....||...|....|.
  Rat   137 LRY-DGLITWDSPAITKSS-CVVDVTYFPFDSQQCNLTFGSWTYNGNQVDIFNALDSGDLSDFIE 199

  Fly   379 PNEHVNTPSGWSFTQMSVVLVENDSQRRYNPKGMMQKMTGDVAIEFTLQRNRSFYMTVFYLPLIA 443
            ..|       |....|..|       :.....|...:...||.....|:|..|||:....:|.:.
  Rat   200 DVE-------WEVHGMPAV-------KNVISYGCCSEPYPDVTFTLLLKRRSSFYIVNLLIPCVL 250

  Fly   444 CQMFLILSFVL--RSTRRSSL-ILIALLIAAWGLMYMTRYASPHYVPPMMTAYKVIMMTTTYCYI 505
            ......|||.|  .|..:.|| :.|.|.:..:.||          |..:|.|.:.:.:...| ||
  Rat   251 ISFLAPLSFYLPAASGEKVSLGVTILLAMTVFQLM----------VAEIMPASENVPLIGKY-YI 304

  Fly   506 LHICIIWLDLYPPRSKAPGWLVRVINSNVLRCILGLRFSDSTDYCDIQENPWHHMAK--ILNNLS 568
            ..:.:|        :.:....:.|:|.:               :|..:..|..|.||  ||..:|
  Rat   305 ATMALI--------TASTALTIMVMNIH---------------FCGAEARPVPHWAKVVILKYMS 346

  Fly   569 SILVI 573
            .||.:
  Rat   347 RILFV 351

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
NtR	NP_651958.2	Methyltransf_FA	90..191	CDD:289052	1/3 (33%)
		Neur_chan_LBD	212..429	CDD:280998	42/219 (19%)
Chrna9	NP_075219.2	LIC	8..474	CDD:273305	84/395 (21%)
		LGIC_ECD_nAChR_A9	31..237	CDD:349823	49/242 (20%)

Information from Original Tools

Tool	Simple Score	Weighted Score	Original Tool Information
			BLAST Result	Score	Score Type	Cluster ID
Compara	0	0.000	Not matched by this tool.
Domainoid	0	0.000	Not matched by this tool.
eggNOG	1	0.900	-	-		E1_KOG3645
Hieranoid	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	0	0.000	Not matched by this tool.
OrthoFinder	0	0.000	Not matched by this tool.
OrthoInspector	0	0.000	Not matched by this tool.
orthoMCL	0	0.000	Not matched by this tool.
Panther	0	0.000	Not matched by this tool.
Phylome	1	0.910	-	-
SonicParanoid	0	0.000	Not matched by this tool.
SwiftOrtho	0	0.000	Not matched by this tool.
TreeFam	0	0.000	Not matched by this tool.
	2	1.810