Protein Alignment NtR and chrna3

DIOPT Version :9

• Sequence 1: NP_651958.2
• Gene: NtR / 43935
• FlyBaseID: FBgn0029147
• Length: 585
• Species: Drosophila melanogaster
• Sequence 2: XP_001921314.1
• Gene: chrna3 / 568467
• ZFINID: ZDB-GENE-070822-1
• Length: 508
• Species: Danio rerio
• Alignment Length: 383
• Identity: 77/383 - (20%)
• Similarity: 143/383 - (37%)
• Gaps: 63/383 - (16%)

  Fly   183 FSSFG-----------SNTARWFYDCGFDGYGSEIAPIVKEETKTEKLLSHLNIQAENASMPANL 236
            ||||.           |......:...|..|...|.|:                  ||.|.|.
Zfish    10 FSSFSPLCFLLSGVCCSEAEHRLFSVIFSSYNQYIRPV------------------ENVSDPV-- 54

  Fly   237 SSISFHFQTRSLA-YEQTSSLLQTRMHMMMHWRDSRLVWKPEDFGSLESFEHPDLRIWKPHMNVL 300
             .:.|......|. .::.:.:::|.:.:...|.|.:|.|.|:|||.:|....|..:||||.:.:.
Zfish    55 -VVQFEVSMSQLVKVDEVNQIMETNLWLRHIWNDYKLRWDPKDFGGVEFIRVPSNKIWKPDIVLY 118

  Fly   301 NGALQSMGQVLQSYELMVYANGSITLYAQNLQLASWCVDSARNWPSERVTCDIELGLNGQEGQEN 365
            |.|:... ||....:.::..||.:|.....: ..|.|......:|.:...|.::.|
Zfish   119 NNAVGDF-QVDDKTKALLRFNGDVTWIPPAI-FKSSCKIDVTYFPFDYQNCTMKFG--------- 172

  Fly   366 VALIYDDQR-KPIAPNEHVNTPSGWSFTQMSVVLVENDS-----QRRYNPKGMMQKMTGDVAIEF 424
             :..||..: ..:.....:|....|...:.:::    |:     ..:||   ..:::..|:....
Zfish   173 -SWTYDKAKIDLVLIGSTINLKDFWESGEWTII----DAPGYKHDIKYN---CCEEIYTDITYSL 229

  Fly   425 TLQRNRSFYMTVFYLPLIACQMFLILSFVLRST--RRSSLILIALLIAAWGLMYMTR-YASPHYV 486
            .::|...||.....:|.:......:|.|.|.|.  .:.:|.:..||.....|:.:|. ..|...|
Zfish   230 YIRRLPLFYTINMIIPCLLISFLTVLVFYLPSDCGEKVTLCISVLLSLTVFLLVITETIPSTSLV 294

  Fly   487 PPMMTAYKVI-MMTTTYCYILHICIIWLDLYPPRSKA-PGWLVRVINSNVLRCILGLR 542
            .|::..|.:. |:..|...::.:.::.:....|::.. |.|:.||..|.:.|.:...|
Zfish   295 IPLIGEYLLFTMIFVTLSIVITVFVLNVHYRTPKTHTMPCWVRRVFLSLLPRVMFMTR 352

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
NtR	NP_651958.2	Methyltransf_FA	90..191	CDD:289052	5/18 (28%)
		Neur_chan_LBD	212..429	CDD:280998	41/223 (18%)
chrna3	XP_001921314.1	LIC	4..499	CDD:273305	77/383 (20%)
		Neur_chan_LBD	29..235	CDD:280998	46/245 (19%)
		Neur_chan_memb	242..498	CDD:280999	24/111 (22%)

Information from Original Tools

Tool	Simple Score	Weighted Score	Original Tool Information
			BLAST Result	Score	Score Type	Cluster ID
Compara	0	0.000	Not matched by this tool.
Domainoid	0	0.000	Not matched by this tool.
eggNOG	0	0.000	Not matched by this tool.
Hieranoid	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	0	0.000	Not matched by this tool.
OrthoFinder	0	0.000	Not matched by this tool.
OrthoInspector	0	0.000	Not matched by this tool.
orthoMCL	0	0.000	Not matched by this tool.
Panther	0	0.000	Not matched by this tool.
Phylome	1	0.910	-	-
RoundUp	0	0.000	Not matched by this tool.
SonicParanoid	0	0.000	Not matched by this tool.
SwiftOrtho	0	0.000	Not matched by this tool.
TreeFam	0	0.000	Not matched by this tool.
ZFIN	0	0.000	Not matched by this tool.
	1	0.910