Protein Alignment NtR and Chrnd

DIOPT Version :9

• Sequence 1: NP_651958.2
• Gene: NtR / 43935
• FlyBaseID: FBgn0029147
• Length: 585
• Species: Drosophila melanogaster
• Sequence 2: NP_062171.1
• Gene: Chrnd / 54240
• RGDID: 2352
• Length: 517
• Species: Rattus norvegicus
• Alignment Length: 360
• Identity: 73/360 - (20%)
• Similarity: 140/360 - (38%)
• Gaps: 54/360 - (15%)

  Fly   174 APLVINYLSFSSFGSNTARWFYDCGFD--GYGSEIAPIVKEETKTEKLLSHLNIQAENASMPANL 236
            |.||:    ..|:|.|..:......|:  ||..|:.|:.::|...:..||            ..|
  Rat    12 AALVV----CGSWGLNEEQRLIQHLFEEKGYNKELRPVARKEDIVDVALS------------LTL 60

  Fly   237 SSISFHFQTRSLAYEQTSSLLQTRMHMMMHWRDSRLVWKPEDFGSLESFEHPDLRIWKPHMNVLN 301
            |::        ::.::....|.|.:.:...|.||||.|...:||::.....|...:|.|.: ||.
  Rat    61 SNL--------ISLKEVEETLTTNVWIDHAWIDSRLQWNANEFGNITVLRLPSDMVWLPEI-VLE 116

  Fly   302 GALQSMGQVLQSYELMVYANGSITLYAQNLQLASWCVDSARNWPSERVTCDI----------ELG 356
            .......|:..:..::|..:|.:|.....: ..|.|..|...:|.:...|.:          |:.
  Rat   117 NNNDGSFQISYACNVLVSDSGHVTWLPPAI-FRSSCPISVTYFPFDWQNCSLKFSSLKYTAKEIR 180

  Fly   357 LNGQEGQENVALIYDDQRKPIAPNEHVNTPSGWSFTQMSV-VLVENDSQRRYNPKGMMQKMT-GD 419
            |:.::.:|      |::..||  ...:..|.|  ||:... .:|...::...:|...|.... .|
  Rat   181 LSLKQEEE------DNRSYPI--EWIIIDPEG--FTENGEWEIVHRAAKVNVDPSVPMDSTNHQD 235

  Fly   420 VAIEFTLQRNRSFYMTVFYLPLIACQMFLILSFVLR---STRRSSLILIALLIAAWGLMYMTRYA 481
            |.....::|...||:....:|.:.....:.|.|.|.   ..:.|..|.:.|..:.:.|:...|..
  Rat   236 VTFYLIIRRKPLFYIINILVPCVLISFMINLVFYLPGDCGEKTSVAISVLLAQSVFLLLISKRLP 300

  Fly   482 SPHYVPPMMTAYKVIMMTTTYCYILHICIIWLDLY 516
            :.....|::..:.:..|......:: ||:|.|:::
  Rat   301 ATSMAIPLVGKFLLFGMVLVTMVVV-ICVIVLNIH 334

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
NtR	NP_651958.2	Methyltransf_FA	90..191	CDD:289052	6/16 (38%)
		Neur_chan_LBD	212..429	CDD:280998	44/228 (19%)
Chrnd	NP_062171.1	LIC	23..476	CDD:273305	68/345 (20%)
		Neur_chan_LBD	25..246	CDD:280998	50/252 (20%)
		Neur_chan_memb	253..489	CDD:280999	15/83 (18%)

Information from Original Tools

Tool	Simple Score	Weighted Score	Original Tool Information
			BLAST Result	Score	Score Type	Cluster ID
Compara	0	0.000	Not matched by this tool.
Domainoid	0	0.000	Not matched by this tool.
eggNOG	1	0.900	-	-		E1_KOG3645
Hieranoid	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	0	0.000	Not matched by this tool.
OrthoFinder	0	0.000	Not matched by this tool.
OrthoInspector	0	0.000	Not matched by this tool.
orthoMCL	0	0.000	Not matched by this tool.
Panther	0	0.000	Not matched by this tool.
Phylome	0	0.000	Not matched by this tool.
SonicParanoid	0	0.000	Not matched by this tool.
SwiftOrtho	0	0.000	Not matched by this tool.
TreeFam	0	0.000	Not matched by this tool.
	1	0.900