Protein Alignment NtR and Chrnb2

DIOPT Version :9

• Sequence 1: NP_651958.2
• Gene: NtR / 43935
• FlyBaseID: FBgn0029147
• Length: 585
• Species: Drosophila melanogaster
• Sequence 2: NP_062170.1
• Gene: Chrnb2 / 54239
• RGDID: 2350
• Length: 500
• Species: Rattus norvegicus
• Alignment Length: 380
• Identity: 87/380 - (22%)
• Similarity: 148/380 - (38%)
• Gaps: 79/380 - (20%)

  Fly   212 EETKTEKLL--SHLNIQAENASMPANLSSISFHFQTRSL-AYEQTSSLLQTRMHMMMHWRDSRLV 273
            ||...|.||  |..|.....|:..:.|.::........| :..:...::.|.:.:...|.|.||.
  Rat    28 EERLVEHLLDPSRYNKLIRPATNGSELVTVQLMVSLAQLISVHEREQIMTTNVWLTQEWEDYRLT 92

  Fly   274 WKPEDFGSLESFEHPDLRIWKPHMNVLNGALQSMGQVLQSYELMVYAN------GSI-----TLY 327
            ||||||.:::....|...||.|.:.:.|.| ..|      ||:..|:|      |||     .:|
  Rat    93 WKPEDFDNMKKVRLPSKHIWLPDVVLYNNA-DGM------YEVSFYSNAVVSYDGSIFWLPPAIY 150

  Fly   328 --AQNLQLASW------CVDSARNWPSERVTCDIELGLNGQEGQENVALIYDDQRKPIAPNEHVN 384
              |..:::..:      |....|:|..:|...|:.|       :.:||.:.|            .
  Rat   151 KSACKIEVKHFPFDQQNCTMKFRSWTYDRTEIDLVL-------KSDVASLDD------------F 196

  Fly   385 TPSG-WSFTQMSVVLVENDSQRRYNPKGMMQKMTGDVAIEFTLQRNRSFYMTVFYLPLIACQMFL 448
            |||| |.       ::....:|..||.   .....|:..:|.::|...||.....:|.:......
  Rat   197 TPSGEWD-------IIALPGRRNENPD---DSTYVDITYDFIIRRKPLFYTINLIIPCVLITSLA 251

  Fly   449 ILSFVLRST--RRSSLILIALLIAAWGLMYMTRYASPHYVP-PMMTAYKVI-MMTTTYCYILHIC 509
            ||.|.|.|.  .:.:|.:..||.....|:.:::...|..:. |::..|.:. |:..|:..:..:|
  Rat   252 ILVFYLPSDCGEKMTLCISVLLALTVFLLLISKIVPPTSLDVPLVGKYLMFTMVLVTFSIVTSVC 316

  Fly   510 IIWLDLYPP--RSKAPGWLVRVINSNVLRCILGLRFSDSTDYCDIQENPWHHMAK 562
            ::.:....|  .:.|| | |:|:....|..:|.|            :.|.|..|:
  Rat   317 VLNVHHRSPTTHTMAP-W-VKVVFLEKLPTLLFL------------QQPRHRCAR 357

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
NtR	NP_651958.2	Methyltransf_FA	90..191	CDD:289052
		Neur_chan_LBD	212..429	CDD:280998	56/239 (23%)
Chrnb2	NP_062170.1	LIC	28..477	CDD:273305	87/380 (23%)
		Neur_chan_LBD	28..233	CDD:280998	57/240 (24%)
		Neur_chan_memb	240..476	CDD:280999	28/132 (21%)

Information from Original Tools

Tool	Simple Score	Weighted Score	Original Tool Information
			BLAST Result	Score	Score Type	Cluster ID
Compara	0	0.000	Not matched by this tool.
Domainoid	0	0.000	Not matched by this tool.
eggNOG	1	0.900	-	-		E1_KOG3645
Hieranoid	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	0	0.000	Not matched by this tool.
OrthoFinder	0	0.000	Not matched by this tool.
OrthoInspector	0	0.000	Not matched by this tool.
orthoMCL	0	0.000	Not matched by this tool.
Panther	0	0.000	Not matched by this tool.
Phylome	1	0.910	-	-
SonicParanoid	0	0.000	Not matched by this tool.
SwiftOrtho	0	0.000	Not matched by this tool.
TreeFam	0	0.000	Not matched by this tool.
	2	1.810