Sequence 1: | NP_651958.2 | Gene: | NtR / 43935 | FlyBaseID: | FBgn0029147 | Length: | 585 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | NP_001074893.1 | Gene: | Chrna10 / 504186 | MGIID: | 3609260 | Length: | 447 | Species: | Mus musculus |
Alignment Length: | 387 | Identity: | 82/387 - (21%) |
---|---|---|---|
Similarity: | 142/387 - (36%) | Gaps: | 73/387 - (18%) |
- Green bases have known domain annotations that are detailed below.
Fly 160 PGFKKEPLLQFIDEAPLVINYLSFSSFGSN---TARWFYDCGFDGYGSEIAPIVKEETKTEKLLS 221
Fly 222 HLNIQAENASMPANLSSISFHFQTRSLAYEQTSSLLQTRMHMMMHWRDSRLVWKPEDFGSLESFE 286
Fly 287 HPDLRIWKPHMNVLNGALQSMGQVLQSYELMVYANGSITLYAQNLQLASWCVDSARNWPSERVTC 351
Fly 352 DIELGLNGQEGQENVALIYDDQRKPIAPNEHVNTPSGWSFTQMSVV-LVEN--------DSQRRY 407
Fly 408 NPKGMMQKMTGDVAIEFTLQRNRSFYMTVFYLPLIACQMFLILSFVL--RSTRRSSL-ILIALLI 469
Fly 470 AAWGLMYMTRYASPHYVPPMMTAYKVIMMTTTYCYILHICIIWLDLYPPRS-KAPGWLVRVI 530 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
NtR | NP_651958.2 | Methyltransf_FA | 90..191 | CDD:289052 | 6/33 (18%) |
Neur_chan_LBD | 212..429 | CDD:280998 | 44/225 (20%) | ||
Chrna10 | NP_001074893.1 | LGIC_ECD | 30..236 | CDD:355788 | 51/248 (21%) |
LGIC_TM_cation | 239..>324 | CDD:349853 | 20/84 (24%) | ||
TM1 helix | 239..261 | CDD:349853 | 5/21 (24%) | ||
Neur_chan_memb | 243..437 | CDD:367256 | 24/98 (24%) | ||
TM2 helix | 269..290 | CDD:349853 | 4/20 (20%) | ||
TM3 helix | 300..322 | CDD:349853 | 6/21 (29%) |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 0 | 0.000 | Not matched by this tool. | |||
Domainoid | 0 | 0.000 | Not matched by this tool. | |||
eggNOG | 1 | 0.900 | - | - | E1_KOG3645 | |
Hieranoid | 0 | 0.000 | Not matched by this tool. | |||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
Isobase | 0 | 0.000 | Not matched by this tool. | |||
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoDB | 0 | 0.000 | Not matched by this tool. | |||
OrthoFinder | 0 | 0.000 | Not matched by this tool. | |||
OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
orthoMCL | 0 | 0.000 | Not matched by this tool. | |||
Panther | 0 | 0.000 | Not matched by this tool. | |||
Phylome | 1 | 0.910 | - | - | ||
RoundUp | 0 | 0.000 | Not matched by this tool. | |||
SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
SwiftOrtho | 0 | 0.000 | Not matched by this tool. | |||
TreeFam | 0 | 0.000 | Not matched by this tool. | |||
2 | 1.810 |