Sequence 1: | NP_651958.2 | Gene: | NtR / 43935 | FlyBaseID: | FBgn0029147 | Length: | 585 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | NP_001097669.2 | Gene: | nAChRalpha4 / 40521 | FlyBaseID: | FBgn0266347 | Length: | 539 | Species: | Drosophila melanogaster |
Alignment Length: | 390 | Identity: | 72/390 - (18%) |
---|---|---|---|
Similarity: | 135/390 - (34%) | Gaps: | 113/390 - (28%) |
- Green bases have known domain annotations that are detailed below.
Fly 187 GSNTARWFYDCGFDGYGSEIAPIVKEETKTE-----KLLSHLNIQAENASMPANLSSISFHFQTR 246
Fly 247 SLAYEQTSSLLQTRMHMMMHWRDSRLVWKPEDFGSLESFEHPDLRIWKPHMNVLNGALQSMGQVL 311
Fly 312 QSYELMVYANGSITLYAQNLQLASW---------CVDSARNWPSERVTCDIELG----------- 356
Fly 357 --LNGQEGQENVA-----------LIYDDQRKPIAPNEHVNTPSGWSFTQMSVVLVENDSQRRYN 408
Fly 409 PKGMMQKMTGDVAIEFTLQRNRSFYMTVFYLPLIACQMFLILSFVLRSTRRSSLIL-IALLIA-- 470
Fly 471 AWGLMYMTRYASPHYVPPMMTAYKV---IMMTTTYCYILHICIIWLDLY---PPRSKAPGWLVRV 529
Fly 530 529 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
NtR | NP_651958.2 | Methyltransf_FA | 90..191 | CDD:289052 | 1/3 (33%) |
Neur_chan_LBD | 212..429 | CDD:280998 | 41/254 (16%) | ||
nAChRalpha4 | NP_001097669.2 | LIC | 1..505 | CDD:273305 | 72/390 (18%) |
Neur_chan_LBD | 12..227 | CDD:280998 | 48/276 (17%) | ||
Neur_chan_memb | 234..505 | CDD:280999 | 21/102 (21%) |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 0 | 0.000 | Not matched by this tool. | |||
Domainoid | 0 | 0.000 | Not matched by this tool. | |||
eggNOG | 1 | 0.900 | - | - | E1_KOG3645 | |
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
Isobase | 0 | 0.000 | Not matched by this tool. | |||
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoDB | 0 | 0.000 | Not matched by this tool. | |||
OrthoFinder | 0 | 0.000 | Not matched by this tool. | |||
OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
orthoMCL | 0 | 0.000 | Not matched by this tool. | |||
Panther | 1 | 1.100 | - | - | P | PTHR18945 |
Phylome | 1 | 0.910 | - | - | ||
RoundUp | 0 | 0.000 | Not matched by this tool. | |||
SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
3 | 2.910 |