DRSC/TRiP Functional Genomics Resources

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Protein Alignment NtR and CG8916

DIOPT Version :9

Sequence 1:NP_651958.2 Gene:NtR / 43935 FlyBaseID:FBgn0029147 Length:585 Species:Drosophila melanogaster
Sequence 2:NP_573090.3 Gene:CG8916 / 32553 FlyBaseID:FBgn0030707 Length:612 Species:Drosophila melanogaster


Alignment Length:386 Identity:86/386 - (22%)
Similarity:148/386 - (38%) Gaps:90/386 - (23%)


- Green bases have known domain annotations that are detailed below.


  Fly   171 IDEAPLVINYLS---FSSF-----------GS-----NTARWFYDCGFDGYGSEIA--PIVKEET 214
            :.:.|.:.|..|   ||||           ||     |.....|.      .|||:  ..|:.:.
  Fly    41 LTKMPNITNEFSSRIFSSFRILPSSKPKTNGSLKRSQNATNLSYS------SSEISNQRRVRRKA 99

  Fly   215 KTEKLLSHLNIQAENASMPANLSSISFHFQTRSLAYEQTSSLLQTR-------------MHMMMH 266
            ..:.|..::::..||.......|.:..|.|...... ||:.|:::.             .:...:
  Fly   100 AADMLSRNISMILENLLKRYEQSQLPTHGQGVPTVV-QTNILIRSMGPVSELDMDYSMDCYFRQY 163

  Fly   267 WRDSRLVWK-PEDFGSLESFEHPDLRIWKPHMNVLNGALQSMGQVLQSYELM-VYANGSITLYAQ 329
            |||.||.:| |....|| |.:..| :||:|.....||....:..:....:|: :..||.| ||:.
  Fly   164 WRDKRLSFKGPIKSLSL-SIKMLD-KIWRPDTYFYNGKHSQIHMITVPNKLLRLDQNGGI-LYSM 225

  Fly   330 NLQLASWCVDSARNWPSERVTCDIELGLNGQEGQENVALIYDDQRKPIAPNEHVNTPSGWSFTQM 394
            .|.:.:.|....:|:|.:|.:|.:.:|..|...|:   |||:                 |.....
  Fly   226 RLTIKATCPMELQNFPMDRQSCPLVIGSYGYINQQ---LIYE-----------------WKNQDD 270

  Fly   395 SVVLVENDSQRRYNPKGMMQ------KMTGDVA---IEFTLQRNRSFYMTVFYLPLIACQMFLIL 450
            :|..|...:..:::...||.      :..||.:   :.|.|:|:..:::...|:|   |.:.::|
  Fly   271 AVSFVPGMTLNQFDLISMMHRNFTTVRREGDFSVLHVAFNLKRHTGYFLIQVYVP---CILIVVL 332

  Fly   451 SFV-------LRSTRRSSLILIALLIAAWGLMYMTRYASPHYVPPMMTAYK-VIMMTTTYC 503
            |:|       ..|.|.|..:...|.::...|...|......|.    ||.. .::|:..||
  Fly   333 SWVSFWIHREATSDRVSLCVTSVLTLSTISLDSRTDLPKVKYA----TALDWFLLMSFLYC 389

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
NtRNP_651958.2 Methyltransf_FA 90..191 CDD:289052 10/38 (26%)
Neur_chan_LBD 212..429 CDD:280998 52/240 (22%)
CG8916NP_573090.3 LIC 92..598 CDD:273305 72/329 (22%)
Neur_chan_LBD 111..315 CDD:280998 52/227 (23%)
Neur_chan_memb 322..>403 CDD:280999 18/75 (24%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - P PTHR18945
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
11.100

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