Protein Alignment NtR and chrnb3b

DIOPT Version :10

• Sequence 1: NP_651958.2
• Gene: NtR / 43935
• FlyBaseID: FBgn0029147
• Length: 585
• Species: Drosophila melanogaster
• Sequence 2: NP_775394.1
• Gene: chrnb3b / 317643
• ZFINID: ZDB-GENE-030102-4
• Length: 462
• Species: Danio rerio
• Alignment Length: 365
• Identity: 73/365 - (20%)
• Similarity: 126/365 - (34%)
• Gaps: 95/365 - (26%)

  Fly   184 SSFGSNTARWFYDCG----------FDGYGSEIAPIVKEETKTEKLLSHLNIQAENASMPANLSS 238
            |.|.:..||.|....          |.||...:.||:           |.|          :...
Zfish    14 SIFATTPAREFVSLAEREDALLRDLFQGYQRWVRPIL-----------HAN----------HTVK 57

  Fly   239 ISFHFQTRSLA-YEQTSSLLQTRMHMMMHWRDSRLVWKPEDFGSLESFEHPDLRIWKPHMNVL-- 300
            :.|..:...|. .::.:.|:.|.:.:...|.|.:|.|.||::|.:.....|...||.|.: ||
Zfish    58 VRFGLKISQLVDVDEKNQLMTTNVWLYEEWLDYKLRWNPENYGGITFIRVPSESIWLPDI-VLYE 121

  Fly   301 NGALQSMGQVLQSYELMVYANGSITLYAQNLQLASWCVDSARNWPSERVTCDIELGLNGQEGQEN 365
            |...:..|.::.  :.:|..||.|| :.......|.|......:|.:|..|.::.|
Zfish   122 NADGRFEGSIMT--KAIVRYNGLIT-WTPPASYKSACTMDVTFFPFDRQNCSMKFG--------- 174

  Fly   366 VALIYDDQRKPIAPNEHVNTPSGWSF--TQMSVVLVENDSQRR---YNPKGMMQKMTGD------ 419
                                  .|::  ..:.:|||.:...|.   .|.:..:...||.
Zfish   175 ----------------------SWTYDGNMVELVLVNHQVDRSDFFDNGEWEILSATGHKGSRRD 217

  Fly   420 -------VAIEFTLQRNRSFYMTVFYLPLIACQMFLILSFVLRS-----TRRSSLILIALLIAAW 472
                   :...|.|:|...||.....:|.:......:|.|.|.|     ...|:.:|::|.:  :
Zfish   218 GHYSYPYITYSFILKRLPLFYTLFLIIPCLGLSFLTVLVFYLPSDEGEKVSLSTSVLVSLTV--F 280

  Fly   473 GLMYMTRYASPHYVPPMMTAYKV-IMMTTTYCYILHICII 511
            .|:......|...|.|::..|.: ||:..|...|:.:.:|
Zfish   281 LLVIEEIIPSSSKVIPLIGEYLLFIMIFVTLSIIVTVFVI 320

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
NtR	NP_651958.2	Methyltransf_FA	89..191	CDD:463505	2/6 (33%)
		Neur_chan_LBD	212..429	CDD:460752	42/237 (18%)
chrnb3b	NP_775394.1	LIC	5..449	CDD:455710	73/365 (20%)