Protein Alignment NtR and chrna1

DIOPT Version :9

• Sequence 1: NP_651958.2
• Gene: NtR / 43935
• FlyBaseID: FBgn0029147
• Length: 585
• Species: Drosophila melanogaster
• Sequence 2: NP_571520.1
• Gene: chrna1 / 30725
• ZFINID: ZDB-GENE-980526-137
• Length: 456
• Species: Danio rerio
• Alignment Length: 484
• Identity: 86/484 - (17%)
• Similarity: 159/484 - (32%)
• Gaps: 182/484 - (37%)

  Fly   199 FDGYGSEIAPIVKEETKTEKLLSHLNIQAENASMPANLSSISFHFQTRSLAYEQTSSLLQTRMHM 263
            |.||...:.|:           ||..   :...:...|..|..      ::.::.:.::.:.:.:
Zfish    32 FTGYNKVVRPV-----------SHFK---DPVVVTVGLQLIQL------ISVDEVNQIVTSNVRL 76

  Fly   264 MMHWRDSRLVWKPEDFGSLESFEHPDLRIWKPHMNVLNGALQSMGQVLQSYELMVYANGSITLYA 328
            ...|:|..|.|.|:|:|.:.....|...:|||.:.:.|.|..... ::...::::...|.|| :.
Zfish    77 KQQWKDVHLQWNPDDYGGIRKIRIPSTDLWKPDLVLYNNADGDFA-IVHETKVLLEHTGMIT-WT 139

  Fly   329 QNLQLASWCVDSARNWPSERVTCDIELGLNGQEGQENVALIYDDQRKPIAPN------------- 380
            ......|:|.....::|.:...|.::||....:|  |:.:|..|..:|...|
Zfish   140 PPAIFKSYCEIVVLHFPFDLQNCSMKLGTWTYDG--NLVIINPDSDRPDLSNFMESGEWVMKDYR 202

  Fly   381 --EH-------VNTP-------------------------SGWSFTQMSVVLVENDSQRRYNPKG 411
              :|       .:||                         ..:||....|..:..||.
Zfish   203 SWKHWVYYACCPDTPYLDITYHFLLLRLPLYFIVNVIIPCMLFSFLTGLVFYLPTDSG------- 260

  Fly   412 MMQKMTGDVAIEFTLQRNRSFYMTVFYL-------------PLIACQMFLILSFVLRSTRRSSLI 463
              :|||..:::..:|        |||.|             |||...|...:.||:     :|:|
Zfish   261 --EKMTLSISVLLSL--------TVFLLVIVELIPSTSSAVPLIGKYMLFTMIFVI-----ASII 310

  Fly   464 LIALLIAAWGLMYMTRYASP--HYVP-----------PMMTAY---------------------- 493
            :..::|       .|.:.||  |.:|           |.|..:
Zfish   311 ITVIVI-------NTHHRSPSTHIMPAWVRKIFIDTIPNMMFFSTMKRPSQERQEKRLFPADFDI 368

  Fly   494 -----KVIMMTTTYCYILHICIIWLDLYPPRSKAPGWLVRVINSNVLRCILGLRFSDSTDYCDIQ 553
                 |.:..:.||             :.|.:|         |.:|...|.|:::...|...|.:
Zfish   369 SDISGKPMPASVTY-------------HSPITK---------NPDVRSAIEGVKYIADTMKSDEE 411

  Fly   554 EN----PWHHMAKILNNLSSILVIITFAI 578
            .|    .|..:|.:|::   ||:.:..|:
Zfish   412 SNNAAEEWKFVAMVLDH---ILLCVFMAV 437

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
NtR	NP_651958.2	Methyltransf_FA	90..191	CDD:289052
		Neur_chan_LBD	212..429	CDD:280998	44/263 (17%)
chrna1	NP_571520.1	LIC	21..447	CDD:273305	86/484 (18%)
		Neur_chan_LBD	24..231	CDD:280998	39/222 (18%)
		Neur_chan_memb	238..446	CDD:280999	47/254 (19%)

Information from Original Tools

Tool	Simple Score	Weighted Score	Original Tool Information
			BLAST Result	Score	Score Type	Cluster ID
Compara	0	0.000	Not matched by this tool.
Domainoid	0	0.000	Not matched by this tool.
eggNOG	1	0.900	-	-		E1_KOG3645
Hieranoid	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	0	0.000	Not matched by this tool.
OrthoFinder	0	0.000	Not matched by this tool.
OrthoInspector	0	0.000	Not matched by this tool.
orthoMCL	0	0.000	Not matched by this tool.
Panther	0	0.000	Not matched by this tool.
Phylome	0	0.000	Not matched by this tool.
RoundUp	0	0.000	Not matched by this tool.
SonicParanoid	0	0.000	Not matched by this tool.
SwiftOrtho	0	0.000	Not matched by this tool.
TreeFam	0	0.000	Not matched by this tool.
ZFIN	0	0.000	Not matched by this tool.
	1	0.900