Protein Alignment NtR and lgc-41

DIOPT Version :9

• Sequence 1: NP_651958.2
• Gene: NtR / 43935
• FlyBaseID: FBgn0029147
• Length: 585
• Species: Drosophila melanogaster
• Sequence 2: NP_001360683.1
• Gene: lgc-41 / 183331
• WormBaseID: WBGene00008022
• Length: 567
• Species: Caenorhabditis elegans
• Alignment Length: 346
• Identity: 71/346 - (20%)
• Similarity: 135/346 - (39%)
• Gaps: 61/346 - (17%)

  Fly   219 LLSHLNIQ--AENASMPAN------LSSISFHFQTRSLAYEQTSSLLQTRMHMMMHWRDSRLVWK 275
            ||...|.:  ..|||:|..      |.|:. :|::..::::       ..:::.|.|:|.||.
 Worm    34 LLQQSNTRPPTANASVPLGVKLGMYLESLG-NFRSSEMSFD-------VDLYVYMSWQDPRLA-- 88

  Fly   276 PEDFGSLESFEHPDLR--IWKPHMNVLNGALQSMGQV-LQSYELMVYANGSITLYAQNLQLASWC 337
             .:|.......:.::|  ||.|.:...|....|..:| :.::.|.|..:|::. |:....|...|
 Worm    89 -HNFSDYVLINNDEIRKQIWLPDLYFANARQASFQEVTVPNFNLFVAPDGTVA-YSCRCTLTVAC 151

  Fly   338 VDSARNWPSERVTCDIELGLNGQEGQENVALIYDDQRKPIAPNEHVNTP--------SGWSFTQM 394
            ..:.|.:|.::..|.|.: |:.....:.|.:.:.| :.|:..||.:..|        :.:.....
 Worm   152 SLNLRYYPMDQQLCSIRV-LSYAYIAKQVNVTWFD-KNPVRFNEEIGLPEFQIEHVSNAYCNGSY 214

  Fly   395 SVVLVENDSQRRYNPKGMMQKMTGDVAIEFTLQRNRSFYMTVFYLPLIACQMFLILSFVLRSTRR 459
            ...|.||..:     ......::|::    .|.|:..:.:...|:|.....|...:||.:  .||
 Worm   215 QYALTENSYK-----SDDFSCLSGNL----FLSRSIGYNLVQSYIPTGLIVMISWVSFWI--DRR 268

  Fly   460 --------SSLILIALLIAAWGLMYMTRYASPH--YVPPMMTAYKVIMMTTTYCYILHICIIWLD 514
                    |...|::|.....||    |:..|.  |...:...|...|. ..:|.:|....|  :
 Worm   269 AVPARVTLSFTTLVSLTTLGNGL----RFGLPQVSYAKAIDLWYGACMF-FVFCALLEFATI--N 326

  Fly   515 LYPPRSKAPGWLVRVINSNVL 535
            .|..:|:....:.:.:.|.||
 Worm   327 SYMRKSEKFDSMAKKMQSVVL 347

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
NtR	NP_651958.2	Methyltransf_FA	90..191	CDD:289052
		Neur_chan_LBD	212..429	CDD:280998	45/228 (20%)
lgc-41	NP_001360683.1	LIC	41..>332	CDD:273305	64/322 (20%)
		LGIC_TM	<527..557	CDD:365787
		TM4 helix	530..554	CDD:349850

Information from Original Tools

Tool	Simple Score	Weighted Score	Original Tool Information
			BLAST Result	Score	Score Type	Cluster ID
Compara	0	0.000	Not matched by this tool.
Domainoid	0	0.000	Not matched by this tool.
eggNOG	0	0.000	Not matched by this tool.
Hieranoid	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
Isobase	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	0	0.000	Not matched by this tool.
OrthoFinder	0	0.000	Not matched by this tool.
OrthoInspector	0	0.000	Not matched by this tool.
orthoMCL	0	0.000	Not matched by this tool.
Panther	0	0.000	Not matched by this tool.
Phylome	1	0.910	-	-
RoundUp	0	0.000	Not matched by this tool.
SonicParanoid	0	0.000	Not matched by this tool.
SwiftOrtho	0	0.000	Not matched by this tool.
TreeFam	0	0.000	Not matched by this tool.
	1	0.910