Protein Alignment NtR and Chrnb3

DIOPT Version :9

• Sequence 1: NP_651958.2
• Gene: NtR / 43935
• FlyBaseID: FBgn0029147
• Length: 585
• Species: Drosophila melanogaster
• Sequence 2: NP_598281.1
• Gene: Chrnb3 / 171131
• RGDID: 621544
• Length: 464
• Species: Rattus norvegicus
• Alignment Length: 469
• Identity: 84/469 - (17%)
• Similarity: 159/469 - (33%)
• Gaps: 151/469 - (32%)

  Fly   199 FDGYGSEIAPIVKEETKTEKLLSHLNIQAENASMPANLSSISFHFQTRSLA-YEQTSSLLQTRMH 262
            |.||...:.|::                  |:|   ::..:.|..:...|. .::.:.|:.|.:.
  Rat    43 FQGYQKWVRPVL------------------NSS---DIIKVYFGLKISQLVDVDEKNQLMTTNVW 86

  Fly   263 MMMHWRDSRLVWKPEDFGSLESFEHPDLRIWKPHMNVLNGALQSMGQVLQSYELMVYANGSITLY 327
            :...|.|.:|.|.||::|.:.|.:.|...:|.|.:.:...|.......|.: :.:|.::|::: :
  Rat    87 LKQEWTDQKLRWNPEEYGGINSIKVPSESLWLPDIVLFENADGRFEGSLMT-KAIVKSSGTVS-W 149

  Fly   328 AQNLQLASWCVDSARNWPSERVTCDIELGLNGQEGQENVALIYDDQRKPIAPNEHVNTPSGWSF- 391
            .......|.|......:|.:|..|.::.|                               .|::
  Rat   150 TPPASYKSSCTMDVTFFPFDRQNCSMKFG-------------------------------SWTYD 183

  Fly   392 -TQMSVVLVENDSQRR----------YNPKGMM-QKMTG-----DVAIEFTLQRNRSFYMTVFYL 439
             |.:.::|:..:..|:          .|.|||. .:..|     .|...|.|:|...||.....:
  Rat   184 GTMVDLILINENVDRKDFFDNGEWEILNAKGMKGNRREGFYSYPFVTYSFVLRRLPLFYTLFLII 248

  Fly   440 PLIACQMFLILSFVLRSTRRSSL-----ILIALLIAAWGLMYMTRYASPHYVPPMMTAYKV-IMM 498
            |.:......:|.|.|.|.....|     :|::|.:  :.|:......|...|.|::..|.: ||:
  Rat   249 PCLGLSFLTVLVFYLPSDEGEKLSLSTSVLVSLTV--FLLVIEEIIPSSSKVIPLIGEYLLFIMI 311

  Fly   499 TTTYCYILHICII---------------------------WLDLYPP----------------RS 520
            ..|...|:.:.:|                           ||.:..|                |.
  Rat   312 FVTLSIIVTVFVINVHHRSSSTYHPMAPWVKRLFLQRLPRWLCMKDPMDRFSFPDGKESDTAVRG 376

  Fly   521 KAPGWLVRVINSNVLRCILGL--RFSDSTDYCD------------IQENPWHHMAKILNN----- 566
            |..|...:...|:..|.::..  :.|:|..|..            :|:  |..:|::|:.
  Rat   377 KVSGKRKQTPASDGERVLVAFLEKASESIRYISRHVKKEHFISQVVQD--WKFVAQVLDRIFLWL 439

  Fly   567 ------LSSILVII 574
                  |.|||:.|
  Rat   440 FLIASVLGSILIFI 453

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
NtR	NP_651958.2	Methyltransf_FA	90..191	CDD:289052
		Neur_chan_LBD	212..429	CDD:280998	39/235 (17%)
Chrnb3	NP_598281.1	LIC	29..455	CDD:273305	84/469 (18%)
		Neur_chan_LBD	35..239	CDD:280998	44/249 (18%)
		Neur_chan_memb	246..452	CDD:280999	37/209 (18%)

Information from Original Tools

Tool	Simple Score	Weighted Score	Original Tool Information
			BLAST Result	Score	Score Type	Cluster ID
Compara	0	0.000	Not matched by this tool.
Domainoid	0	0.000	Not matched by this tool.
eggNOG	1	0.900	-	-		E1_KOG3645
Hieranoid	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	0	0.000	Not matched by this tool.
OrthoFinder	0	0.000	Not matched by this tool.
OrthoInspector	0	0.000	Not matched by this tool.
orthoMCL	0	0.000	Not matched by this tool.
Panther	0	0.000	Not matched by this tool.
Phylome	1	0.910	-	-
SonicParanoid	0	0.000	Not matched by this tool.
SwiftOrtho	0	0.000	Not matched by this tool.
TreeFam	0	0.000	Not matched by this tool.
	2	1.810