Protein Alignment NtR and Chrnb4

DIOPT Version :9

• Sequence 1: NP_651958.2
• Gene: NtR / 43935
• FlyBaseID: FBgn0029147
• Length: 585
• Species: Drosophila melanogaster
• Sequence 2: NP_683746.1
• Gene: Chrnb4 / 108015
• MGIID: 87892
• Length: 495
• Species: Mus musculus
• Alignment Length: 326
• Identity: 72/326 - (22%)
• Similarity: 128/326 - (39%)
• Gaps: 67/326 - (20%)

  Fly   217 EKLLSHL--NIQAENASMPANLSS--ISFHFQ---TRSLAYEQTSSLLQTRMHMMMHWRDSRLVW 274
            |||:..|  ..:..|...||..||  ||...:   ::.::..:...::.|.:.:...|.|.||.|
Mouse    27 EKLMDDLLNKTRYNNLIRPATSSSQLISIRLELSLSQLISVNEREQIMTTSIWLKQEWTDYRLAW 91

  Fly   275 KPEDFGSLESFEHPDLRIWKPHMNVLNGALQSMGQVLQSYELMVY------ANGSI-----TLY- 327
            ....:..:.....|..|:|.|.:.:.|.|       ..:||:.||      :||||     .:|
Mouse    92 NSSCYEGVNILRIPAKRVWLPDIVLYNNA-------DGTYEVSVYTNVIVRSNGSIQWLPPAIYK 149

  Fly   328 -AQNLQLASW------CVDSARNWPSERVTCDIELGLNGQEGQENVALIYDDQRKPIAPNEHVNT 385
             |..:::..:      |....|:|..:....|:.|        ::...|.||           .|
Mouse   150 SACKIEVKHFPFDQQNCTLKFRSWTYDHTEIDMVL--------KSPTAIMDD-----------FT 195

  Fly   386 PSG-WSFTQMSVVLVENDSQRRYNPKGMMQKMTGDVAIEFTLQRNRSFYMTVFYLPLIACQMFLI 449
            ||| |.       :|....:|..||:   .....||..:|.::|...||.....:|.:......|
Mouse   196 PSGEWD-------IVALPGRRTVNPQ---DPSYVDVTYDFIIKRKPLFYTINLIIPCVLITSLAI 250

  Fly   450 LSFVLRST--RRSSLILIALLIAAWGLMYMTRYASPHYVP-PMMTAYKVI-MMTTTYCYILHICI 510
            |.|.|.|.  .:.:|.:..||...:.|:.:::...|..:. |::..|.:. |:..|:..:..:|:
Mouse   251 LVFYLPSDCGEKMTLCISVLLALTFFLLLISKIVPPTSLDIPLIGKYLLFTMVLVTFSIVTTVCV 315

  Fly   511 I 511
            :
Mouse   316 L 316

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
NtR	NP_651958.2	Methyltransf_FA	90..191	CDD:289052
		Neur_chan_LBD	212..429	CDD:280998	53/238 (22%)
Chrnb4	NP_683746.1	LIC	21..483	CDD:273305	72/326 (22%)
		Neur_chan_LBD	26..231	CDD:280998	54/239 (23%)
		Neur_chan_memb	238..481	CDD:280999	16/79 (20%)

Information from Original Tools

Tool	Simple Score	Weighted Score	Original Tool Information
			BLAST Result	Score	Score Type	Cluster ID
Compara	0	0.000	Not matched by this tool.
Domainoid	0	0.000	Not matched by this tool.
eggNOG	1	0.900	-	-		E1_KOG3645
Hieranoid	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
Isobase	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	0	0.000	Not matched by this tool.
OrthoFinder	0	0.000	Not matched by this tool.
OrthoInspector	0	0.000	Not matched by this tool.
orthoMCL	0	0.000	Not matched by this tool.
Panther	0	0.000	Not matched by this tool.
Phylome	0	0.000	Not matched by this tool.
RoundUp	0	0.000	Not matched by this tool.
SonicParanoid	0	0.000	Not matched by this tool.
SwiftOrtho	0	0.000	Not matched by this tool.
TreeFam	0	0.000	Not matched by this tool.
	1	0.900