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Protein Alignment prc and frm

DIOPT Version :9

Sequence 1:	NP_524658.2	Gene:	prc / 43930	FlyBaseID:	FBgn0028573	Length:	1713	Species:	Drosophila melanogaster
Sequence 2:	NP_001137887.1	Gene:	frm / 38624	FlyBaseID:	FBgn0035612	Length:	1180	Species:	Drosophila melanogaster

Alignment Length:	695	Identity:	194/695 - (27%)
Similarity:	238/695 - (34%)	Gaps:	197/695 - (28%)

- Green bases have known domain annotations that are detailed below.

  Fly   535 GYGT----------QPGVGAQTGTGQPGYGAQPGVGTQ-------TGAGQPGYGSQPGI------ 576
            ||.|          .|.:.::|..|.    ::||:..|       .|.|:...|:|.|:
  Fly   101 GYRTVEPEKPVETFPPHLYSETNGGP----SEPGIVLQWEELYFPIGCGKFANGAQHGVPFFLDD 161

  Fly   577 ----GGQTGAGQPGYGTQPGVGAQT----GTGQPGYGAQPGVGTQTGAGQPGYGSQPGYG--TQP 631
                ||...|       .|...|.|    |:.|.........|.....|...:|:..|:.  :.|
  Fly   162 FKNKGGSNDA-------IPSFSANTIVIKGSDQKSLPIHKPTGPLVPQGTGIFGTDKGHSDLSHP 219

  Fly   632 GVGAQTGTGQPGYGAQPGVGGQTGAGQPGYGTQPGIGGQTGAGQPGYGSQPGI------GGQTGG 690
            |..|      |.:                :.....:.|....||....|.|.:      ||..|.
  Fly   220 GDQA------PSF----------------HSVNTLLPGSNNDGQYVPDSNPYVHVIGPNGGNGGN 262

  Fly   691 GQPGYGSQIGGQTGAGQPSYGSQPGVGAQNGAGQPGYGTQPVIGGQTGAGQPGYGGQTGVGGSPG 755
            |..|.|...||..|.|        |||        |:       |..|.|.|  .|..|..|.||
  Fly   263 GGSGSGGGFGGNGGFG--------GVG--------GF-------GPNGPGGP--NGPKGPKGPPG 302

  Fly   756 FLTQPGIGGISGPIGGKLGGGQSEAAKPGYWAQPGIGGPSRYGSQPGIGDQTGTG-----QSGYG 815
               .||..|..||:|.  |||.|  .||.|          :.|.:.|:||.:|.|     .:|.|
  Fly   303 ---PPGPPGGLGPVGA--GGGAS--GKPVY----------KDGDRTGLGDGSGNGSGDRISTGNG 350

  Fly   816 GQPG-----ISGQTGG-GQPGYGGQATISGLPGYGTQPGIGALTAVPGGHYGYETQPGIGGQTGT 874
            |..|     |||..|| |    .|...::|..|     |:||     |..|    ..|.||..|:
  Fly   351 GGAGAGDRYISGNGGGVG----AGDRYVTGNGG-----GVGA-----GDRY----TTGNGGAAGS 397

  Fly   875 NQ---PGFGGQ--PGIGGQTGAGQPGYGFIGQPGIGGQTGTSGRQPGYGTQPGIGGQTAAGQPG- 933
            ..   .|.||:  .|.||..|..:.|.|  ...|.|.:.....|....||.......|..|.||
  Fly   398 GDRYTAGNGGRYNTGNGGAVGGDRTGTG--AASGFGIEASGQYRPDNEGTYTSTYTHTETGFPGA 460

  Fly   934 ------YGSQTGVGGQIGAGQPG--YGSQPG----IGGQTGAGQPGY----GAQPGFGGQPGYGN 982
                  .|...|.||:......|  |....|    :.|.||...|.|    |.:.||||..|.|:
  Fly   461 IPYTPDNGKYNGNGGRYNGINDGRYYHDDSGKYVHVEGPTGPPAPPYVHVVGPEGGFGGNGGKGD 525

  Fly   983 QPGVGGQTGAGQPGYGSQPGIGGQTGA----GQPGYGAQPGFGGQLGYGNQPGVGGQTGAGQPGY 1043
                ||..|.|.|  |...|.||..|.    |.||....||         .||..|..|..:||.
  Fly   526 ----GGGVGPGGP--GGPKGPGGPKGPNGPNGPPGPPGPPG---------PPGPPGPKGPTKPGP 575

  Fly  1044 GSQPGVGGQTGAGQPGYGVIPGFGGQPGIGGQTAAGKPGYGGQPGIGGSPVYGTQQGTGGQSGIS 1108
            ...||..|..|...|   ..||..|.||..|.|...:||..|.||       .|:.|..|..|.:
  Fly   576 FGPPGPPGPPGPPGP---TRPGPYGPPGPPGPTGPTRPGPPGPPG-------PTRPGPPGPPGPT 630

  Fly  1109 GGQPGYGTQPGQTGAGQPG-YGSLPGTGGQATAGQPGYGPGSQPG 1152
            ...|...|:||..|..:|| .|..|.....:....|||.|.:|||
  Fly   631 RPGPPGPTRPGPPGPTRPGPPGPSPNDPRYSDKETPGYLPPNQPG 675

Known Domains:

Indicated by green bases in alignment.

Software error:

Illegal division by zero at /www/www.flyrnai.org/docroot/cgi-bin/DRSC_prot_align.pl line 591.

For help, please send mail to the webmaster (ritg@hms.harvard.edu), giving this error message and the time and date of the error.