DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment prc and GREP1

DIOPT Version :10

Sequence 1:NP_524658.2 Gene:prc / 43930 FlyBaseID:FBgn0028573 Length:1713 Species:Drosophila melanogaster
Sequence 2:NP_001383387.1 Gene:GREP1 / 283875 HGNCID:27549 Length:519 Species:Homo sapiens


Alignment Length:710 Identity:197/710 - (27%)
Similarity:250/710 - (35%) Gaps:277/710 - (39%)


- Green bases have known domain annotations that are detailed below.


  Fly   506 PGVGAQTGAGQPGYGSQPGIGGQTGAGQPGYGTQPGVGAQTGTGQPGYGAQPGVGTQTG------ 564
            ||:|..       ||...|:    |||..| |.:|        .:||:..:.|:|||.|      
Human    28 PGLGKV-------YGPHSGL----GAGYDG-GVKP--------QKPGFVVRHGLGTQPGFRTFAG 72

  Fly   565 -AGQPGYGSQPGIGGQTGAGQPGYGTQPGVGAQTGTGQPGYGAQPGVGTQTGAGQPGYGSQPGYG 628
             |.|||||:  |:|   .|..|..|.|.|:|:::|.|.   |..||.||     .|||.:..|.|
Human    73 AAAQPGYGN--GLG---AAAFPVAGAQSGLGSRSGLGA---GTLPGAGT-----PPGYNNGNGPG 124

  Fly   629 TQPGVGAQTGTGQPGYGAQPGVGGQTGAGQPGYGTQPGIGGQTGAGQPGYGSQPGIGGQTGGGQP 693
            ||||..||.|.|                                   ||:|         |||:|
Human   125 TQPGPAAQNGFG-----------------------------------PGFG---------GGGKP 145

  Fly   694 GYGSQIGGQTGAGQPSYGSQPGVGAQNGAGQPGYGTQPVIGGQTGAGQPGYGGQTGVGGSPGFLT 758
                              .:||...|||. :|||         .||.:|         ..|||..
Human   146 ------------------QKPGPTTQNGY-RPGY---------VGAVKP---------QKPGFQY 173

  Fly   759 QPGIGGISGPIGGKLGGGQSEAAKPGYWAQPGIGGPSRYGSQPGIGDQTGTGQSGYGGQPGISGQ 823
            :.|:|                       ||||..|..: ..:|.:     |.|:.:|...|:.|.
Human   174 RIGLG-----------------------AQPGFRGDMK-AQEPVL-----TAQNRFGFGAGLGGN 209

  Fly   824 TGGGQPGYGGQATISGLPGYGTQPGIGALTAVPGGHYGYETQPGIGGQTGTNQPGFGG-----QP 883
            ....:||||.:......||.||||           .||:...||:       |||.|.     .|
Human   210 VKPLKPGYGKRLRAGAFPGAGTQP-----------EYGHGNGPGV-------QPGLGAGMKPQMP 256

  Fly   884 GIGGQTGAGQPGYGFIGQPGIGGQTGTSGRQPGYGTQPGIGGQTAAGQPGYGSQTGVGGQIGAGQ 948
            |:|...|.| ||.|..|.||            |...:|.:........|||      .|.:.|.:
Human   257 GLGAPNGYG-PGRGRAGVPG------------GPERRPWVPHLLPFSSPGY------LGVMKAQK 302

  Fly   949 PGYG-----SQPGIGGQTGAGQPGYGAQPGFGGQPGYGN------------QPGVGGQTGAGQPG 996
            ||.|     .:||:.|.....:.|:|.:.  |..||..|            .|||......|. |
Human   303 PGAGEGMKPQKPGLRGTLKPQKSGHGHEN--GPWPGPCNARVAPMLLPRLPTPGVPSDKEGGW-G 364

  Fly   997 YGSQPGIGGQTG---AGQP--GY--GAQPGFGG-------QLGYGNQPGVGGQTGA-----GQPG 1042
            ..|||....|.|   ..||  ||  ||:|||.|       .|||||     |..||     ..| 
Human   365 LKSQPPSAVQNGKLPGHQPPNGYGPGAEPGFNGGLEPQKIGLGYGN-----GVLGARVFPEAHP- 423

  Fly  1043 YGSQPGVGGQTGAGQPGYGVIPGFGGQPGIGG----QTAAGKPGYGGQPGIGGSPVYGTQQGTGG 1103
                          |||:....||..:.|:..    :.||..|...||.|:..:..:.|.|..| 
Human   424 --------------QPGFHGANGFRNRDGVEALVYPKAAALAPEGNGQAGVLWNSRWPTLQAWG- 473

  Fly  1104 QSGISGGQPGYGTQPGQTGAGQPGYGSLPGTGGQATAGQPGYGPGSQPGIGGQTVGGHGG 1163
                :|.:|||  |.|...|              ....||| ||..:.|..||...|:||
Human   474 ----AGLKPGY--QAGDEYA--------------EARSQPG-GPDVKRGSNGQLGNGYGG 512

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
prcNP_524658.2 FhaB 110..1468 CDD:442443 197/710 (28%)
Glutenin_hmw 148..727 CDD:367362 66/227 (29%)
GREP1NP_001383387.1 None

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