Sequence 1: | NP_524658.2 | Gene: | prc / 43930 | FlyBaseID: | FBgn0028573 | Length: | 1713 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | NP_031768.2 | Gene: | Col1a1 / 12842 | MGIID: | 88467 | Length: | 1453 | Species: | Mus musculus |
Alignment Length: | 1354 | Identity: | 444/1354 - (32%) |
---|---|---|---|
Similarity: | 530/1354 - (39%) | Gaps: | 284/1354 - (20%) |
- Green bases have known domain annotations that are detailed below.
Fly 5 RLGLLLGAVLFVASANGAAIENEVSSLNDLQREKRSGRGYSRGQTQSQYLNFGKPE-------ED 62
Fly 63 GKAEAEATENGSRSTVSGTHGMGQAQSQFSSGDCNGCSGYQTDY--PSSGRILDASGSGGIGRPD 125
Fly 126 SIISLPGGVGGQTGAGQAGYGSQLGVGAQAGAGQPGYGDQPGVGTQPGVGQPGYGSQPGIGGQTG 190
Fly 191 AGQPGYG--------SQPGIGGQTG-AGQPGYGSQPVVGAQTGTGQPGYGAQPGVGTQTGAGQPG 246
Fly 247 YGSQPGIGGQTG----ARQPGYVTQPG----VGAQTGIGQPGYGAQPGILGQTG-AGQPGYGSQP 302
Fly 303 GIGGQTG-AGQPGYGTQPGVGAQTG-TGQPGYGAQPG-VGTQTGAGQPGYGSQPGIGGQTG-AGQ 363
Fly 364 PGYGTQPG-VGAQTGAGQPGYGAQPGVGAQTGAGQPGYGSQPGIGGQTG-AGQPGYGSQPGIGGQ 426
Fly 427 TGARQPGYGSQPGV-GAQTGAGQPGYGAQPGVGAQTGAGQPGYGSQPGIGGQTGA-GQPGYGSQP 489
Fly 490 GVGAQTGAGQPGYGAQPGVGAQTGA-GQPGYGSQPGIGGQTGAGQPGYGTQPGVGAQTG-TGQPG 552
Fly 553 YGAQPG----VGTQTGAGQPGYGSQPGIGGQTGAGQPGYGTQPGVGAQTG-------TGQPGYGA 606
Fly 607 QPGVGTQTGAGQPGYGSQPGYGTQPGVGAQTG-TGQPGYGAQPGVGGQTGA-GQPGYGTQPGIGG 669
Fly 670 QTG-AGQPGYGSQPGIGGQTG-GGQPGYGSQIGGQTGAGQPSYGSQPGVGAQNGAGQPG-YGTQP 731
Fly 732 VIG-----GQTGA-GQPGYGGQTGVGGSPGFLTQPGIGGISGPIGGKLGGGQSEAAKPGYWAQPG 790
Fly 791 IGGPSRYGSQPGIGDQTGTGQSGYGGQPGISGQTG----------GGQPGYGGQATISGLPGYGT 845
Fly 846 QPGIGALTAVPGGHYGYETQPGIGGQTGTNQP-GFGGQPGIGGQTGA-GQPG----YGFIGQPGI 904
Fly 905 GGQTGTSGRQPGYGTQPGIGGQTAAGQPGYGSQTGVGGQIG-------AGQPG----YGSQPGIG 958
Fly 959 --GQTG-AGQPGYGAQPGFGGQPGYGNQPGVGGQTGAGQPGYGSQPGIGGQTG-AGQPGYGAQPG 1019
Fly 1020 FGGQLGYGNQPGVGGQTGA----GQPGYGSQPGVGGQTG----AGQPGYGVIPGFGGQPGIGGQT 1076
Fly 1077 A----AGKPGYGGQPGIGGSPVYGTQQGTGGQSGISGGQPGYGTQPGQTGAGQPGYGSLPGTGGQ 1137
Fly 1138 ATAGQPGYGPGSQPGIGGQT----VGGHGGYGSQPGIGGAPVYGTQPGGGGQTGVIG--GQPGQI 1196
Fly 1197 GDRVGQPGYGTQTGQIGAP---GRYTD-GSQTVPGAVGTGGVVAAGTSGADDAF 1246 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
prc | NP_524658.2 | Pericardin_rpt | 159..191 | CDD:284468 | 12/31 (39%) |
Pericardin_rpt | 176..208 | CDD:284468 | 15/40 (38%) | ||
Loricrin | 216..534 | CDD:292475 | 122/335 (36%) | ||
Pericardin_rpt | 227..259 | CDD:284468 | 11/35 (31%) | ||
Pericardin_rpt | 244..276 | CDD:284468 | 12/39 (31%) | ||
Pericardin_rpt | 295..326 | CDD:284468 | 10/31 (32%) | ||
Pericardin_rpt | 312..344 | CDD:284468 | 13/33 (39%) | ||
Pericardin_rpt | 346..378 | CDD:284468 | 13/33 (39%) | ||
Pericardin_rpt | 363..395 | CDD:284468 | 13/32 (41%) | ||
Pericardin_rpt | 397..429 | CDD:284468 | 14/32 (44%) | ||
Pericardin_rpt | 431..463 | CDD:284468 | 10/32 (31%) | ||
Pericardin_rpt | 465..497 | CDD:284468 | 13/32 (41%) | ||
Pericardin_rpt | 482..514 | CDD:284468 | 8/31 (26%) | ||
Pericardin_rpt | 516..547 | CDD:284468 | 10/30 (33%) | ||
Pericardin_rpt | 533..565 | CDD:284468 | 10/36 (28%) | ||
Pericardin_rpt | 567..598 | CDD:284468 | 11/30 (37%) | ||
Pericardin_rpt | 584..616 | CDD:284468 | 12/38 (32%) | ||
Pericardin_rpt | 624..656 | CDD:284468 | 9/32 (28%) | ||
Pericardin_rpt | 641..673 | CDD:284468 | 12/33 (36%) | ||
Pericardin_rpt | 841..873 | CDD:284468 | 8/31 (26%) | ||
Pericardin_rpt | 893..929 | CDD:284468 | 11/39 (28%) | ||
Glutenin_hmw | 925..>1382 | CDD:281191 | 121/359 (34%) | ||
Pericardin_rpt | 948..992 | CDD:284468 | 19/50 (38%) | ||
Pericardin_rpt | 977..1009 | CDD:284468 | 13/32 (41%) | ||
Col1a1 | NP_031768.2 | VWC | 31..86 | CDD:214564 | 13/78 (17%) |
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite | 94..1210 | 418/1242 (34%) | |||
Nonhelical region (N-terminal) | 152..167 | 4/14 (29%) | |||
Triple-helical region | 168..1181 | 387/1131 (34%) | |||
Collagen | 225..284 | CDD:189968 | 21/61 (34%) | ||
Collagen | 258..317 | CDD:189968 | 22/61 (36%) | ||
Collagen | 486..545 | CDD:189968 | 22/63 (35%) | ||
Collagen | 525..584 | CDD:189968 | 22/65 (34%) | ||
Collagen | 657..714 | CDD:189968 | 23/63 (37%) | ||
Collagen | 705..755 | CDD:189968 | 20/74 (27%) | ||
Cell attachment site. /evidence=ECO:0000255 | 734..736 | 0/1 (0%) | |||
Collagen | <784..822 | CDD:189968 | 18/40 (45%) | ||
Collagen | 1068..1123 | CDD:189968 | 14/56 (25%) | ||
Cell attachment site. /evidence=ECO:0000255 | 1082..1084 | 0/1 (0%) | |||
Nonhelical region (C-terminal) | 1182..1207 | 3/8 (38%) | |||
COLFI | 1219..1452 | CDD:279718 | |||
Blue background indicates that the domain is not in the aligned region. |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 0 | 0.000 | Not matched by this tool. | |||
Domainoid | 0 | 0.000 | Not matched by this tool. | |||
eggNOG | 0 | 0.000 | Not matched by this tool. | |||
Hieranoid | 0 | 0.000 | Not matched by this tool. | |||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
Isobase | 0 | 0.000 | Not matched by this tool. | |||
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoDB | 0 | 0.000 | Not matched by this tool. | |||
OrthoFinder | 0 | 0.000 | Not matched by this tool. | |||
OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
orthoMCL | 0 | 0.000 | Not matched by this tool. | |||
Panther | 0 | 0.000 | Not matched by this tool. | |||
Phylome | 0 | 0.000 | Not matched by this tool. | |||
RoundUp | 0 | 0.000 | Not matched by this tool. | |||
SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
SwiftOrtho | 0 | 0.000 | Not matched by this tool. | |||
TreeFam | 0 | 0.000 | Not matched by this tool. | |||
0 | 0.000 |