Protein Alignment chm and HAM2

DIOPT Version :10

• Sequence 1: NP_609117.4
• Gene: chm / 43928
• FlyBaseID: FBgn0028387
• Length: 811
• Species: Drosophila melanogaster
• Sequence 2: NP_196536.1
• Gene: HAM2 / 830834
• AraportID: AT5G09740
• Length: 445
• Species: Arabidopsis thaliana
• Alignment Length: 351
• Identity: 161/351 - (45%)
• Similarity: 221/351 - (62%)
• Gaps: 31/351 - (8%)

  Fly   470 NNFLDSKVKLEK-DV------TDEDREPNLAGL---------VPDYDLQLFREAQAQASERIEDE 518
            |..||...:|:: |:      .||..|..:..|         :.:..::...|..| ||.|..:|
plant   104 NRRLDEWTQLDQLDLDSVECAVDEKVEDKVTSLKMTRHQKRKIDETHIEGHEELDA-ASLREHEE 167

  Fly   519 LKDLPVGKGIKYISMGKYKMKVWYQSPYPDDAARLPKMYICEFCLRYQKSETGIKRHAEKCVWRH 583
            ...:   |.|..|.:|||:::.||.||:|.:.....|::.|||||.:.|.:..::||..||..:|
plant   168 FTKV---KNISTIELGKYEIETWYFSPFPPEYNDCVKLFFCEFCLNFMKRKEQLQRHMRKCDLKH 229

  Fly   584 PPGDEIYRKGKLQVWQVDGKRYKQYCQHLCLLAKFFLDHKTLYYDVEPFLFYIMTLADVDGCHIV 648
            ||||||||.|.|.:::||||:.|.|.|:||.|||.|||||||||||:.||||::...|..|||:|
plant   230 PPGDEIYRSGTLSMFEVDGKKNKVYAQNLCYLAKLFLDHKTLYYDVDLFLFYVLCECDDRGCHMV 294

  Fly   649 GYFSKHIPFLQEKNS--FYNVSCILTLPPYQRKGYGRLLIDFSYLLTRVEGKIGSPEKPLSDLGL 711
            |||||      ||:|  .||::||||||.|||||||:.||.|||.|::.|||:|:||:|||||||
plant   295 GYFSK------EKHSEEAYNLACILTLPSYQRKGYGKFLIAFSYELSKKEGKVGTPERPLSDLGL 353

  Fly   712 ISYRSYWKDVLLDYLCNRSGNTIAIKDVSQETAIYSYDIVSTLQALGMMKYWKGKHIVLKKQDVL 776
            :|||.||..|||:.|....|| |:||::|..|||.:.||:||||:|.:::|.||:|::.....||
plant   354 LSYRGYWTRVLLEILKKHKGN-ISIKELSDVTAIKAEDILSTLQSLELIQYRKGQHVICADPKVL 417

  Fly   777 DEYEERVKRRGTFPKIDDSCLRWQPF 802
            |.:.:...|.|.  .:|.|.|.|.|:
plant   418 DRHLKAAGRGGL--DVDASKLIWTPY 441

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
chm	NP_609117.4	zf-C2HC	376..404	CDD:460240
		PLN00104	<470..802	CDD:215056	160/349 (46%)
HAM2	NP_196536.1	PLN00104	1..445	CDD:215056	161/351 (46%)