DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment chm and Kat6b

DIOPT Version :9

Sequence 1:NP_001260192.1 Gene:chm / 43928 FlyBaseID:FBgn0028387 Length:811 Species:Drosophila melanogaster
Sequence 2:XP_006519326.1 Gene:Kat6b / 54169 MGIID:1858746 Length:2054 Species:Mus musculus


Alignment Length:754 Identity:249/754 - (33%)
Similarity:364/754 - (48%) Gaps:150/754 - (19%)


- Green bases have known domain annotations that are detailed below.


  Fly    92 PKSK-----LSSDDDEYEDSAPPAK----KNSRAMGSSTVTAAAAASAARRKPPASVNKPSNP-- 145
            ||:|     ||...||...||...:    :..:...|:|.::..|||........:|..|:.|  
Mouse   346 PKNKLKQRLLSVTSDEGSMSAFTGRGSPGRGQKTKVSTTPSSGHAASGKHSSSRLAVTDPTRPGA 410

  Fly   146 -ANKPSNPTQRSAN----NNTNRSLENG---------EGKRPSLSSSSNSTDDSMKIVKNGRKVP 196
             ....::.|..||:    |...:.|.:|         :|:|     |.....|..|..:..:||.
Mouse   411 TTKTTTSSTYISASTLKVNKKTKGLIDGLTKFFTPSPDGRR-----SRGEIIDFSKHYRPRKKVS 470

  Fly   197 LKMAST-----------VRPKQIRGKLPPAKKNGGGPVISSDGSSGSESGSNSGDESSSGSESEG 250
            .|.:.|           ::|.. ...||||..:|..|  ||..||.|.|.:::  :|||....|.
Mouse   471 QKQSCTSHVLATGTTQKLKPAP-SALLPPAPISGQSP--SSQKSSSSTSSTST--QSSSSQSGEP 530

  Fly   251 SDSSNSYSSQPVKGGAKGKRSGPTKIQNSDSEEERKDKANPMRKLTRSLSMRRTKQQPKQETDSE 315
            |.||.:.:||     .|....|.:.|..:..:..:  |.:|                        
Mouse   531 SFSSLTNNSQ-----LKALFDGLSHIYTTQGQSRK--KGHP------------------------ 564

  Fly   316 SDGDLEDDKIMISKSPAKKPAPSNLNASKSKVKREPIGISSGVLSSIKSRPVSPITQTEKKCPIE 380
                        |.:|.|:.......:|.:|.|....|     ....:||.:|     ...|   
Mouse   565 ------------SYAPPKRMRRKTEFSSTAKAKARFFG-----KRDFRSRLLS-----HSSC--- 604

  Fly   381 GCDSSGHLSGNLDK---HFLPEACPIYHNMSASECKERANERKLRNEQRLKMPVNIVTAPGNQNT 442
               |.|...|::.|   ||                |.....:|.|...|||  ..:....|..::
Mouse   605 ---SWGMTRGHIFKAIAHF----------------KRTTFLKKHRMLGRLK--YKVTPQMGTPSS 648

  Fly   443 NLKTLSPEQREFLAKIRESRANFKPANNNFLDSKVKLEKDVTDEDREPNLAG---LVPDYDLQLF 504
            ...:|:           :.|.|  |..:|..|.|:.:::    |..:.:|.|   ||.:.||.:|
Mouse   649 GKGSLA-----------DGRIN--PDQDNDTDIKISIKQ----ESADVSLVGNKELVTEEDLDVF 696

  Fly   505 REAQAQASERIEDELKDLPVGKGIKYISMGKYKMKVWYQSPYPDDAARLPKMYICEFCLRYQKSE 569
            ::||..:.|:||.|......|:....|..|||:::.||.||||.:.|||||:|:|||||:|.||:
Mouse   697 KQAQELSWEKIECESGVEDCGRYPSVIEFGKYEIQTWYSSPYPQEYARLPKLYLCEFCLKYMKSK 761

  Fly   570 TGIKRHAEKCVWRHPPGDEIYRKGKLQVWQVDGKRYKQYCQHLCLLAKFFLDHKTLYYDVEPFLF 634
            ..:.||::||.|.|||.:||||:..|.|::|||...|.|||:||||||.||||||||||||||||
Mouse   762 NILLRHSKKCGWFHPPANEIYRRKDLSVFEVDGNMSKIYCQNLCLLAKLFLDHKTLYYDVEPFLF 826

  Fly   635 YIMTLADVDGCHIVGYFSKHIPFLQEKNSFYNVSCILTLPPYQRKGYGRLLIDFSYLLTRVEGKI 699
            |::|..|..|||:||||||. ...|:|   ||||||:.:|.:||:|:||.||||||||:|.||:.
Mouse   827 YVLTKNDEKGCHLVGYFSKE-KLCQQK---YNVSCIMIMPQHQRQGFGRFLIDFSYLLSRREGQA 887

  Fly   700 GSPEKPLSDLGLISYRSYWKDVLLDYLCNRSGNTIAIKDVSQETAIYSYDIVSTLQALGMMKYWK 764
            |||||||||||.:||.:|||.|:|:||.......|:||.:|:.|.:..:||.:|||.|.|:....
Mouse   888 GSPEKPLSDLGRLSYLAYWKSVILEYLYRHHERHISIKAISRATGMCPHDIATTLQHLHMIDRRD 952

  Fly   765 GKHIVLKKQDVLDEYEERVKRRGTFPKIDDSCLRWQPFI 803
            |:.::::::.::..:.|::|......::|...|||.|.:
Mouse   953 GRFVIIRREKLILGHMEKLKNCSRPNELDPESLRWTPML 991

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
chmNP_001260192.1 zf-C2HC 376..402 CDD:279824 7/28 (25%)
NAT_SF 526..802 CDD:302625 143/275 (52%)
MOZ_SAS 584..766 CDD:280097 106/181 (59%)
Kat6bXP_006519326.1 H15 94..168 CDD:197772
PHD1_MOZ_MORF 213..270 CDD:277090
PHD2_KAT6A_6B 272..318 CDD:277002
PLN00104 <721..989 CDD:215056 143/271 (53%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG5027
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D629545at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
43.820

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