Protein Alignment chm and CG1894

DIOPT Version :9

• Sequence 1: NP_001260192.1
• Gene: chm / 43928
• FlyBaseID: FBgn0028387
• Length: 811
• Species: Drosophila melanogaster
• Sequence 2: NP_651620.1
• Gene: CG1894 / 43378
• FlyBaseID: FBgn0039585
• Length: 421
• Species: Drosophila melanogaster
• Alignment Length: 482
• Identity: 148/482 - (30%)
• Similarity: 224/482 - (46%)
• Gaps: 93/482 - (19%)

  Fly   341 NASKSKVKREPIGISSGVLSSIKSRP-VSPITQTEKKCPIEGCDSSGHLSGNLDKHFLPEACPIY 404
            |.|...:|.:|:|...|:.|.:...| ...:|..::.....|
  Fly     5 NRSGDHLKYQPLGDQDGISSKLPDIPRALQLTNAKESSATRG----------------------- 46

  Fly   405 HNMSASECKERANERKLRNEQRLKMPVNIVTAPGNQNTNLKTLSPEQREFLAKIRESRANFKPAN 469
              :..|..|....:.:|:|:..|:..:        |.|  ||::.      :.|...|....|
  Fly    47 --LGQSASKSEMGKSQLQNDSSLQKNI--------QET--KTITG------SCIEAQRIGATP-- 91

  Fly   470 NNFLDSKVKLEKDVTDEDREPNLAGLVPDYDLQLFREAQA-----QASERIEDELKD-------- 521
                  |.:||     ..:|||:..|       |...|.:     |..|.|::|..|
  Fly    92 ------KKQLE-----GVKEPNMISL-------LHTNASSNVDDRQRQETIDNEKSDVQKEKEDA 138

  Fly   522 -LPVGKGIKYISMGKYKMKVWYQSPYPDDAARLPKMYICEFCLRYQKSETGIKRHAEKCVWRHPP 585
             :.|.:.|:.:..|:|:::....||||....:...:|:|||||:|.........|...|..|.||
  Fly   139 KVKVIRNIEKVQFGRYEIETTSSSPYPVINDKATTIYVCEFCLKYMCLRKSYSYHLYDCKKRCPP 203

  Fly   586 GDEIYRKGKLQVWQVDGKRYKQYCQHLCLLAKFFLDHKTLYYDVEPFLFYIMTLADVDGCHIVGY 650
            |..:|||..:.:::|||.:.:.|||.|||::|.||::|.:.|....|||||:.|.|.||.|..||
  Fly   204 GSLLYRKDNIYIYEVDGHKEQLYCQCLCLMSKLFLENKKILYSSSSFLFYILCLKDKDGEHFAGY 268

  Fly   651 FSKHIPFLQEKNSFYNVSCILTLPPYQRKGYGRLLIDFSYLLTRVEGKIGSPEKPLSDLGLISYR 715
            |::....|.     .|::|||.||||.|||||:||||.||.::|.|..||.|:||||.:..:.|.
  Fly   269 FAREKTMLN-----INLNCILVLPPYMRKGYGKLLIDLSYEISRREACIGGPKKPLSKVARLCYL 328

  Fly   716 SYWKDVLLDYLCNRSG-NTIAIKDVSQETAIYSYDIVSTLQALGMMKYWKGKHIVLKKQDVLDEY 779
            |||..:||:.|.:.|. :.:.|:::|:.|.....||:|||:.:||.||:|..||:......:.|
  Fly   329 SYWGHILLNLLRHHSSPDLVTIEELSKATGFREEDIISTLEFMGMTKYYKVDHIMFYTTSSIIE- 392

  Fly   780 EERVKRRG--TFPK----IDDSCLRWQ 800
                .|||  .|.|    |..:.|.|:
  Fly   393 ----DRRGLAQFKKPRLTIHRNRLSWK 415

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
chm	NP_001260192.1	zf-C2HC	376..402	CDD:279824	1/25 (4%)
		NAT_SF	526..802	CDD:302625	111/282 (39%)
		MOZ_SAS	584..766	CDD:280097	83/182 (46%)
CG1894	NP_651620.1	NAT_SF	130..395	CDD:302625	105/274 (38%)
		MOZ_SAS	202..378	CDD:280097	82/180 (46%)

Information from Original Tools

Tool	Simple Score	Weighted Score	Original Tool Information
			BLAST Result	Score	Score Type	Cluster ID
Compara	1	0.930	-	-		C45463872
Domainoid	0	0.000	Not matched by this tool.
eggNOG	1	0.900	-	-		E1_COG5027
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
Isobase	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	1	1.010	-	-		D629545at2759
OrthoFinder	0	0.000	Not matched by this tool.
OrthoInspector	0	0.000	Not matched by this tool.
orthoMCL	0	0.000	Not matched by this tool.
Panther	1	1.100	-	-	P	PTHR10615
Phylome	1	0.910	-	-
RoundUp	0	0.000	Not matched by this tool.
SonicParanoid	0	0.000	Not matched by this tool.
	5	4.850