Protein Alignment chm and d4

DIOPT Version :9

• Sequence 1: NP_001260192.1
• Gene: chm / 43928
• FlyBaseID: FBgn0028387
• Length: 811
• Species: Drosophila melanogaster
• Sequence 2: NP_610163.1
• Gene: d4 / 35485
• FlyBaseID: FBgn0033015
• Length: 497
• Species: Drosophila melanogaster
• Alignment Length: 368
• Identity: 75/368 - (20%)
• Similarity: 120/368 - (32%)
• Gaps: 108/368 - (29%)

  Fly   142 PSNPANKPSNPTQRSANNNTNRSLENGEGKRPSLSSSSNST-DDSMKIVKNGRKVPLKMASTVRP 205
            ||:...||    :|....|.|:|....:.:..:|..|.:.| .....|..:|..||
  Fly    89 PSSRWRKP----KRQYLLNPNQSFRAYQYREHNLQHSHHQTHQHHHHIPSSGVAVP--------- 140

  Fly   206 KQIRGKLPPAKKNGGGPVISSDGSSGSESGSNSGDESSSGSESE-------------------GS 251
                 :.|...::..  :.::||:|...||.|...:|.:..|.|                   ..
  Fly   141 -----QNPHLAESAA--IAATDGNSMGASGDNDSKDSHANVEKEWFHDEMDTSHFHHGDEFEDDF 198

  Fly   252 DSSNSYSSQPVKGGAKGKRSGPTKIQ-NSDSEEERKDKANPMRKLTRSLSMRRTKQQPKQETDSE 315
            ||.|.:.......|.:.|.|.|.:.. |.:...:|..|....|:              |...:.|
  Fly   199 DSDNDFDESYTSRGKRKKCSRPRRTNANVEGTPKRGRKGGGNRR--------------KNAVEGE 249

  Fly   316 SDGDLEDDKIMISKSPAKKPAPSNLNASKSKVKREPIGISSGVLSSIKSRPVSPITQTEKKCPIE 380
            ||..........:.|.|...|.    |:.:........::|..|.:..|...|||       ||.
  Fly   250 SDRKRRAGGNSANTSAAAAAAA----AAVAHAACTAAAVASTGLYASHSNSASPI-------PIN 303

  Fly   381 GCDS-SG-----HLSGNLDK---------HFLPEACPIYHN---MSASECKER------------ 415
            ..:| ||     ::|.:.||         ..:|.|..:..|   .:::.|...
  Fly   304 DDNSQSGLILPTNISSSYDKTSSDAGASNDSIPLATMVAINAGLTTSNVCNAHPVQTGTNQTVFA 368

  Fly   416 -ANERKLRNEQRLKMPVNIVTAP------GNQNTNLKTLSPEQ 451
             .|:.|.|.|:.:..|     :|      |:|..|.||..||:
  Fly   369 TGNKVKQRVERDIAQP-----SPYCDFCLGDQRENKKTNMPEE 406

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
chm	NP_001260192.1	zf-C2HC	376..402	CDD:279824	10/40 (25%)
		NAT_SF	526..802	CDD:302625
		MOZ_SAS	584..766	CDD:280097
d4	NP_610163.1	Requiem_N	30..98	CDD:290758	4/12 (33%)
		PHD1_d4	387..442	CDD:277091	7/20 (35%)
		PHD2_d4	444..489	CDD:277005

Information from Original Tools

Tool	Simple Score	Weighted Score	Original Tool Information
			BLAST Result	Score	Score Type	Cluster ID
Compara	1	0.930	-	-		C45463865
Domainoid	0	0.000	Not matched by this tool.
eggNOG	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
Isobase	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	0	0.000	Not matched by this tool.
OrthoFinder	0	0.000	Not matched by this tool.
OrthoInspector	0	0.000	Not matched by this tool.
orthoMCL	0	0.000	Not matched by this tool.
Panther	0	0.000	Not matched by this tool.
Phylome	0	0.000	Not matched by this tool.
RoundUp	0	0.000	Not matched by this tool.
SonicParanoid	0	0.000	Not matched by this tool.
	1	0.930