Protein Alignment chm and tth

DIOPT Version :10

• Sequence 1: NP_609117.4
• Gene: chm / 43928
• FlyBaseID: FBgn0028387
• Length: 811
• Species: Drosophila melanogaster
• Sequence 2: NP_572904.1
• Gene: tth / 32318
• FlyBaseID: FBgn0030502
• Length: 428
• Species: Drosophila melanogaster
• Alignment Length: 366
• Identity: 73/366 - (19%)
• Similarity: 118/366 - (32%)
• Gaps: 138/366 - (37%)

  Fly     6 GSSSSESGSSST-------------SGSTSSET-----GSSSDTDSSSATPEEKPSTNSSAKSQT 52
            ||:|..|.||.|             .||..|:|     |:.|..:|||.......:::|....|.
  Fly   140 GSNSLASSSSLTLNMLTGGGAAPAVLGSLHSDTAHDFNGAFSLEESSSLGAAGGDTSDSKDSQQQ 204

  Fly    53 QTQQQTNSGNAQRRKPVP------------AASEDKPKPSVAPSSKKVNNPPKSKLSSDDDEYED 105
            |.||..:...|.:.:.:|            ..|.::||                  |..|||| |
  Fly   205 QHQQHQHQQQAVKEELLPKEWFYDDMDMNDVDSLEEPK------------------SPADDEY-D 250

  Fly   106 SAP-----------PAKKNSRAMGSSTVTAA------AAASAARRKPPASVNKPSNPANKPSNPT 153
            ..|           |.|:...:.|......|      ..:|::||:..|:
  Fly   251 YDPRYGNKKRRKRRPGKRGGDSGGGGGGGGAGGGGNSGGSSSSRRRSAAA--------------- 300

  Fly   154 QRSANNNTNRSLENGEGKRPSLSSSSNSTDDSMKIVKNGRKVPLKMASTVRPKQIRGKLPPAKKN 218
                              |..::::..:.|.|::.:::|..||                    .:
  Fly   301 ------------------RSRITTTDAALDASLEAIESGESVP--------------------GS 327

  Fly   219 GGGPVISSDGSSGSESGSNSGDESSSGSESEGSDSSNSYSSQPVKGGAKGKR--SGPTKIQNSDS 281
            .|||:.|....|||.....:|...|.|.......|:||..|:  ..|.:|:|  .||.....:..
  Fly   328 NGGPISSGGILSGSLGAGLAGVSGSGGGGGASGASANSRRSR--GAGTRGRRRAKGPNSAVGASC 390

  Fly   282 EEERKDKANPMRKLTRSLSMRRTKQQPKQETDSESDGDLED 322
                 |..:|...:          :.|..|:.:.:.|.:||
  Fly   391 -----DPTSPGMVI----------EPPSFESAAAAVGVVED 416

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
chm	NP_609117.4	zf-C2HC	376..404	CDD:460240
		PLN00104	<470..802	CDD:215056
tth	NP_572904.1	DPF1-3_N	24..89	CDD:464074