DRSC/TRiP Functional Genomics Resources

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Protein Alignment chm and kat6a

DIOPT Version :10

Sequence 1:NP_609117.4 Gene:chm / 43928 FlyBaseID:FBgn0028387 Length:811 Species:Drosophila melanogaster
Sequence 2:NP_001116784.4 Gene:kat6a / 266966 ZFINID:ZDB-GENE-021022-3 Length:2246 Species:Danio rerio


Alignment Length:831 Identity:247/831 - (29%)
Similarity:359/831 - (43%) Gaps:206/831 - (24%)


- Green bases have known domain annotations that are detailed below.


  Fly   138 SVNKPSNPANKPSNPTQRSANNNTNRSLENGEGKRPSLSSSSNSTDDSMKIVKNGR--KVPLKMA 200
            ::.|......:||.  :|..|   ..|:.:|..::..|.....|       ||:|.  ||..|..
Zfish    16 AIKKVKKQKQRPSE--ERICN---AVSMSHGLDRKTVLEHLELS-------VKDGSILKVSNKGL 68

  Fly   201 STVRPKQIRGKL--PPAKKNGGGPVISSDGSSGSESGSNSGDESSSGSESEGSDSSNSYSSQPVK 263
            ::.:.....|:|  |..:..|||....|.|..|...||:    :||.|:..|.|     .::.:|
Zfish    69 NSYKDPDNPGRLSFPKPRAGGGGGGCGSGGGGGGGGGSS----TSSSSKKPGLD-----WNKLIK 124

  Fly   264 GGAKG-KRSGPTKIQNSDSEEERKDKANPMRKLTRSLSM--------------------RRTKQQ 307
            ...:| ...|.:.:::  .|...|.:|:....|:.|.||                    |..||.
Zfish   125 RSLEGLHEPGGSSLKS--IERFLKCQADVAGYLSGSGSMGPGIFHQQLRLALKRACSHGRVVKQG 187

  Fly   308 PKQETDSESDGD-----------------LEDDKIMISKSPAKKPAP------SNLNASKSKVKR 349
            |.....|.|..|                 .|.|:      |..:|.|      .....::.|...
Zfish   188 PLFRLVSRSSHDGTGCVSLDSLPPVRLLPHEQDR------PVAEPIPICSFCLGTKEQNRDKKPE 246

  Fly   350 EPIGI----SSGVLSSIKSRPVSPI-----------TQTEKKCPIEG--------CDSSGHLSGN 391
            |.|..    :||..|.:|..|...:           .:|...|..:|        |||       
Zfish   247 ELISCADCGNSGHPSCLKFSPELTVRVKALWWQCIECKTCSSCQDQGKNADNMLFCDS------- 304

  Fly   392 LDKHFLPEAC-PIYHNMS-----ASECKERANERKLRNEQ--RLKMPVNIV-------------- 434
            .|:.|..|.| |....|.     ...|:.|...|||.:::  ::|...|..              
Zfish   305 CDRGFHMECCDPPLTRMPKGMWICQICRPREKGRKLLHDKAAQIKRRYNAPLGRPKGRPGRPFKK 369

  Fly   435 ---------------------------------------------------TAPGNQNTNLKTL- 447
                                                               :|.|:...|.||. 
Zfish   370 IRGGGRGRRRRGAGGVDQCSQGSSSPHSSSSSSCEGYPGDDRMLFSLREDDSAHGSLRFNKKTKG 434

  Fly   448 -----------SPEQREFLAKI----RESRANFKPANNNFLDSKVKLEKDVT-----DEDREPNL 492
                       ||:.|:..|::    ::.|...|.......|.:....::.:     |||:.|..
Zfish   435 LIDALSKFFTPSPDGRKARAEVVDYSQQYRMRKKGNRKGEHDDRTGDNQECSDSWREDEDKLPGH 499

  Fly   493 AGLVPDYDLQLFREAQAQASERIEDELKDLPVGKGIKYISMGKYKMKVWYQSPYPDDAARLPKMY 557
            ..|. :.|::|||..|..|.:::.......|..:....|..|||:::.||.||||.:.:||||:|
Zfish   500 ENLT-EKDVELFRHIQEIALQKVGVTGPPDPQMRCPSVIEFGKYEIQTWYSSPYPQEYSRLPKLY 563

  Fly   558 ICEFCLRYQKSETGIKRHAEKCVWRHPPGDEIYRKGKLQVWQVDGKRYKQYCQHLCLLAKFFLDH 622
            :|||||||.||.:.:.:|..||.|.|||.:|||||..:.|::|||.....|||:||||||.||||
Zfish   564 LCEFCLRYMKSRSILYQHMRKCNWFHPPANEIYRKDDVSVFEVDGNVSTIYCQNLCLLAKLFLDH 628

  Fly   623 KTLYYDVEPFLFYIMTLADVDGCHIVGYFSKHIPFLQEKNSFYNVSCILTLPPYQRKGYGRLLID 687
            |||||||||||||::|..|..|||:||||||. ...|:|   ||||||:.||.||||||||.|||
Zfish   629 KTLYYDVEPFLFYVLTQNDNKGCHLVGYFSKE-KHCQQK---YNVSCIMILPQYQRKGYGRFLID 689

  Fly   688 FSYLLTRVEGKIGSPEKPLSDLGLISYRSYWKDVLLDYLCNRSGNTIAIKDVSQETAIYSYDIVS 752
            |||||::.||:.|||||||||||.:||.:||:.|:|:.|.......::|:.:|:.|.|...||.:
Zfish   690 FSYLLSKREGQPGSPEKPLSDLGRLSYMAYWRSVVLECLHEIRDRQLSIRKLSKVTGICPQDITA 754

  Fly   753 TLQALGMMKYWKGKHIVLKKQDVLDEYEERVKRRGTFPKIDDSCLRWQPFI 803
            ||..|.|::......|:::::.::..:..|:|.:....::|..||||.|.|
Zfish   755 TLLNLNMLEQKGDGVIIMRREKLVANHMARLKAKPRLLEVDPDCLRWTPVI 805

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
chmNP_609117.4 zf-C2HC 376..404 CDD:460240 10/36 (28%)
PLN00104 <470..802 CDD:215056 154/336 (46%)
kat6aNP_001116784.4 H15 122..185 CDD:197772 11/64 (17%)
PHD1_MOZ_MORF 226..283 CDD:277090 10/56 (18%)
PHD2_KAT6A_6B 285..331 CDD:277002 12/52 (23%)
PLN00104 446..803 CDD:215056 160/361 (44%)
PHA03247 <979..1247 CDD:223021
Blue background indicates that the domain is not in the aligned region.

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