DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment chm and kat8

DIOPT Version :9

Sequence 1:NP_001260192.1 Gene:chm / 43928 FlyBaseID:FBgn0028387 Length:811 Species:Drosophila melanogaster
Sequence 2:NP_997907.1 Gene:kat8 / 100003790 ZFINID:ZDB-GENE-030131-7510 Length:487 Species:Danio rerio


Alignment Length:489 Identity:186/489 - (38%)
Similarity:267/489 - (54%) Gaps:59/489 - (12%)


- Green bases have known domain annotations that are detailed below.


  Fly   348 KREPIGISSGVLSSIKSRPVSPITQTEKKCPIEGCDSSGHLSGNLDKHFLPEACPIYHNMSASEC 412
            :|..:.|.||...:.:.|..:....|        |.|:|  ||..:...  ||.......:.|..
Zfish    12 ERMDVEIDSGHAGTDRGRLETGTRAT--------CSSNG--SGGEEDEM--EAADREREATGSST 64

  Fly   413 KERANERKLRNEQRLKMPVNIVTAPGNQNTNLKTLSPEQREFLAKIRESRANFKPANNNF----- 472
            ...|:...|...:..::.|.|......|.|: ||...      |::.:||.|.:.....|     
Zfish    65 PRSADGVSLGGGREQEVSVEIGETYLCQRTD-KTWHS------AEVIQSRLNEQEGREEFYVHYV 122

  Fly   473 -----LD-----SKVKLEKDVTDEDREPNLAG----LVPDYDLQLFREAQAQASE---------- 513
                 ||     :::.|.|.|.|..|:....|    ||...:.::.|..:.:..|          
Zfish   123 GFNRRLDEWVGKARLALTKTVKDAVRKSVEEGGGGELVDQPERKITRNQKRKHDEINHVQKTYAE 187

  Fly   514 ------RIEDELKDLPVGKGIKYISMGKYKMKVWYQSPYPDDAARLPKMYICEFCLRYQKSETGI 572
                  .:|.|.:.:...|.:..|.:|.:::..||.||:|:|..:.||::|||:||:|.|.|...
Zfish   188 MDPTTAALEKEHEAITKVKYVDKIQIGNFEIDAWYFSPFPEDYGKQPKLWICEYCLKYMKYEKTF 252

  Fly   573 KRHAEKCVWRHPPGDEIYRKGKLQVWQVDGKRYKQYCQHLCLLAKFFLDHKTLYYDVEPFLFYIM 637
            :.|..:|.||.|||.|||||..:.|::||||.:|.|||:||||||.||||||||:|||||:|||:
Zfish   253 RYHLSQCQWRQPPGKEIYRKNNISVYEVDGKDHKIYCQNLCLLAKLFLDHKTLYFDVEPFIFYIL 317

  Fly   638 TLADVDGCHIVGYFSKHIPFLQEKNSFYNVSCILTLPPYQRKGYGRLLIDFSYLLTRVEGKIGSP 702
            |..:..|.||||||||.    :|.....||:||||||||||:|||:.||.|||.|:::|..:|||
Zfish   318 TEVNKQGAHIVGYFSKE----KESPDGNNVACILTLPPYQRRGYGKFLIAFSYELSKLESTVGSP 378

  Fly   703 EKPLSDLGLISYRSYWKDVLLDYLCNRSGNTIAIKDVSQETAIYSYDIVSTLQALGMMKYWKGKH 767
            ||||||||.:||||||..|||:.|.:..| |::|||:||.|:|...||:||||.|.|:|||||:|
Zfish   379 EKPLSDLGKLSYRSYWSWVLLEILRDFRG-TLSIKDLSQMTSITQSDIISTLQPLNMVKYWKGQH 442

  Fly   768 IVLKKQDVLDEYEERVKRRGTFPKIDDSCLRWQP 801
            ::.....:::|:.:..:.:.....:|..||:|.|
Zfish   443 VICVTPKLVEEHLKSAQYKKPPITVDTHCLKWAP 476

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
chmNP_001260192.1 zf-C2HC 376..402 CDD:279824 7/25 (28%)
NAT_SF 526..802 CDD:302625 145/276 (53%)
MOZ_SAS 584..766 CDD:280097 114/181 (63%)
kat8NP_997907.1 PLN00104 31..478 CDD:215056 181/470 (39%)
Tudor-knot 83..139 CDD:288553 13/62 (21%)
NAT_SF 189..456 CDD:302625 142/271 (52%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG5027
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D285390at33208
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
32.820

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