DRSC/TRiP Functional Genomics Resources

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Protein Alignment chm and kat8

DIOPT Version :10

Sequence 1:NP_609117.4 Gene:chm / 43928 FlyBaseID:FBgn0028387 Length:811 Species:Drosophila melanogaster
Sequence 2:NP_997907.2 Gene:kat8 / 100003790 ZFINID:ZDB-GENE-030131-7510 Length:487 Species:Danio rerio


Alignment Length:489 Identity:186/489 - (38%)
Similarity:268/489 - (54%) Gaps:59/489 - (12%)


- Green bases have known domain annotations that are detailed below.


  Fly   348 KREPIGISSGVLSSIKSRPVSPITQTEKKCPIEGCDSSGHLSGNLDKHFLPEACPIYHNMSASEC 412
            :|..:.|.||...:.:.|..:....|        |.|:|  ||..:...  ||.......:.|..
Zfish    12 ERMDVEIDSGHAGTDRGRLETGTRAT--------CSSNG--SGGEEDEM--EAADREREATGSST 64

  Fly   413 KERANERKLRNEQRLKMPVNIVTAPGNQNTNLKTLSPEQREFLAKIRESRANFKPANNNF----- 472
            ...|:...|...:..::.|.|......|.|: ||...      |::.:||.|.:.....|     
Zfish    65 PRSADGVSLGGGREQEVSVEIGETYLCQRTD-KTWHS------AEVIQSRLNEQEGREEFYVHYV 122

  Fly   473 -----LD-----SKVKLEKDVTDEDREPNLAG----LVPDYDLQLFREAQAQASE---------- 513
                 ||     :::.|.|.|.|..|:....|    ||...:.::.|..:.:..|          
Zfish   123 GFNRRLDEWVGKARLALTKTVKDAVRKSVEEGGGGELVDQPERKITRNQKRKHDEINHVQKTYAE 187

  Fly   514 ------RIEDELKDLPVGKGIKYISMGKYKMKVWYQSPYPDDAARLPKMYICEFCLRYQKSETGI 572
                  .:|.|.:.:...|.:..|.:|.:::..||.||:|:|..:.||::|||:||:|.|.|...
Zfish   188 MDPTTAALEKEHEAITKVKYVDKIQIGNFEIDAWYFSPFPEDYGKQPKLWICEYCLKYMKYEKTF 252

  Fly   573 KRHAEKCVWRHPPGDEIYRKGKLQVWQVDGKRYKQYCQHLCLLAKFFLDHKTLYYDVEPFLFYIM 637
            :.|..:|.||.|||.|||||..:.|::||||.:|.|||:||||||.||||||||:|||||:|||:
Zfish   253 RYHLSQCQWRQPPGKEIYRKNNISVYEVDGKDHKIYCQNLCLLAKLFLDHKTLYFDVEPFIFYIL 317

  Fly   638 TLADVDGCHIVGYFSKHIPFLQEKNSFYNVSCILTLPPYQRKGYGRLLIDFSYLLTRVEGKIGSP 702
            |..:..|.||||||||.    :|.....||:||||||||||:|||:.||.|||.|:::|..:|||
Zfish   318 TEVNKQGAHIVGYFSKE----KESPDGNNVACILTLPPYQRRGYGKFLIAFSYELSKLESTVGSP 378

  Fly   703 EKPLSDLGLISYRSYWKDVLLDYLCNRSGNTIAIKDVSQETAIYSYDIVSTLQALGMMKYWKGKH 767
            ||||||||.:||||||..|||:.|.:..| |::|||:||.|:|...||:||||:|.|:|||||:|
Zfish   379 EKPLSDLGKLSYRSYWSWVLLEILRDFRG-TLSIKDLSQMTSITQSDIISTLQSLNMVKYWKGQH 442

  Fly   768 IVLKKQDVLDEYEERVKRRGTFPKIDDSCLRWQP 801
            ::.....:::|:.:..:.:.....:|..||:|.|
Zfish   443 VICVTPKLVEEHLKSAQYKKPPITVDTHCLKWAP 476

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
chmNP_609117.4 zf-C2HC 376..404 CDD:460240 7/27 (26%)
PLN00104 <470..802 CDD:215056 160/367 (44%)
kat8NP_997907.2 PLN00104 31..478 CDD:215056 181/470 (39%)

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