DRSC/TRiP Functional Genomics Resources

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Protein Alignment jim and ZNF486

DIOPT Version :9

Sequence 1:NP_001262221.1 Gene:jim / 43924 FlyBaseID:FBgn0027339 Length:938 Species:Drosophila melanogaster
Sequence 2:NP_443084.2 Gene:ZNF486 / 90649 HGNCID:20807 Length:463 Species:Homo sapiens


Alignment Length:351 Identity:116/351 - (33%)
Similarity:159/351 - (45%) Gaps:61/351 - (17%)


- Green bases have known domain annotations that are detailed below.


  Fly   318 HKNKPHSDLRLFKCLTCGKDFKQKSTLLQHDRIHTDARPFPCSECGKRFRQQSHLTQHLRIHANE 382
            ||.: |::.:..|.:...|.|.|.||...|.:|.|..:|:.|.||||.|.:.||||.|...|..|
Human   172 HKRR-HTEKKPLKYIEGDKAFNQSSTHTTHKKIDTGEKPYKCEECGKAFNRSSHLTTHKITHTRE 235

  Fly   383 KPFTCPYCSRSFRQRAILNQHIRIHSGEKPFACPECGKHFRQKAILNQHVRTHQDVSPHLIFKNG 447
            ||:.|..|.:.|:..:....|.:|||||||:.|.||||.|.....|..|...|            
Human   236 KPYKCEECGKVFKYFSSFTTHKKIHSGEKPYICEECGKAFMYPYTLTTHKIIH------------ 288

  Fly   448 PHPTLWPSDVPFPGEDNDTKGDIAGTGGGYHDEDSQGTPDGSGGMHYPSYFKDGKGQKILPEVLQ 512
                  ..:.|:..::.|.                        ..::|:.....|  ||      
Human   289 ------TGEQPYKCKECDK------------------------AFNHPATLSSHK--KI------ 315

  Fly   513 HIGVRPANMPLYVRCPICDKEFKQKTTLLQHGCIHIESRPYPCPECGKRFRQQSHLTQHLRIHTN 577
            |.|.:|      ..|..|.|.|...:.|.:|..||...:||.|.||||.|.:.||||.|..|||.
Human   316 HTGEKP------YTCDKCGKAFISSSILSKHEKIHTGEKPYKCEECGKAFTRSSHLTMHKIIHTG 374

  Fly   578 EKPFGCMYCPRFFRQRTILNQHLRIHTGEKPYKCGQCGKDFRQKAILDQHTRTHQGDRPFCCPMP 642
            |||:.|..|.:.|.....|::|.|.|||||||||.:|||.:...:.|.:|..||.|::|:.|  .
Human   375 EKPYKCEECGKAFTWSAGLHKHRRTHTGEKPYKCEECGKAYTTSSNLTEHKTTHTGEKPYKC--K 437

  Fly   643 NCRRRFATENEVTKHIDNHM--NPNT 666
            .|.:.|...:::.||...|:  .|.|
Human   438 ECGKAFNWSSDLNKHKRIHIGQKPRT 463

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
jimNP_001262221.1 C2H2 Zn finger 331..351 CDD:275368 6/19 (32%)
COG5048 355..666 CDD:227381 103/312 (33%)
zf-C2H2 357..379 CDD:278523 11/21 (52%)
C2H2 Zn finger 359..379 CDD:275368 11/19 (58%)
zf-H2C2_2 371..396 CDD:290200 11/24 (46%)
C2H2 Zn finger 387..407 CDD:275368 4/19 (21%)
zf-H2C2_2 400..424 CDD:290200 14/23 (61%)
C2H2 Zn finger 415..435 CDD:275368 8/19 (42%)
C2H2 Zn finger 527..547 CDD:275368 6/19 (32%)
zf-C2H2 553..575 CDD:278523 12/21 (57%)
C2H2 Zn finger 555..575 CDD:275368 11/19 (58%)
C2H2 Zn finger 583..603 CDD:275368 6/19 (32%)
zf-H2C2_2 596..620 CDD:290200 15/23 (65%)
C2H2 Zn finger 611..631 CDD:275368 6/19 (32%)
zf-H2C2_2 624..650 CDD:290200 9/25 (36%)
C2H2 Zn finger 639..661 CDD:275368 5/21 (24%)
ZNF486NP_443084.2 KRAB 13..71 CDD:214630
KRAB 15..52 CDD:279668
C2H2 Zn finger 155..176 CDD:275368 2/4 (50%)
COG5048 188..>463 CDD:227381 111/332 (33%)
C2H2 Zn finger 188..204 CDD:275368 6/15 (40%)
C2H2 Zn finger 212..232 CDD:275368 11/19 (58%)
zf-H2C2_2 224..249 CDD:290200 11/24 (46%)
C2H2 Zn finger 240..260 CDD:275368 4/19 (21%)
C2H2 Zn finger 268..288 CDD:275368 8/19 (42%)
zf-H2C2_2 281..305 CDD:290200 5/65 (8%)
C2H2 Zn finger 296..316 CDD:275368 5/51 (10%)
zf-H2C2_2 309..333 CDD:290200 10/37 (27%)
C2H2 Zn finger 324..344 CDD:275368 6/19 (32%)
zf-H2C2_2 337..361 CDD:290200 12/23 (52%)
C2H2 Zn finger 352..372 CDD:275368 11/19 (58%)
zf-H2C2_2 364..388 CDD:290200 12/23 (52%)
C2H2 Zn finger 380..400 CDD:275368 6/19 (32%)
zf-H2C2_2 395..417 CDD:290200 14/21 (67%)
C2H2 Zn finger 408..428 CDD:275368 6/19 (32%)
zf-H2C2_2 420..444 CDD:290200 8/25 (32%)
C2H2 Zn finger 436..456 CDD:275368 5/21 (24%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR24384
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
User_Submission 00.000 Not matched by this tool.
11.100

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