DRSC/TRiP Functional Genomics Resources

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Protein Alignment jim and ZNF195

DIOPT Version :9

Sequence 1:NP_001262221.1 Gene:jim / 43924 FlyBaseID:FBgn0027339 Length:938 Species:Drosophila melanogaster
Sequence 2:NP_001123992.1 Gene:ZNF195 / 7748 HGNCID:12986 Length:629 Species:Homo sapiens


Alignment Length:335 Identity:107/335 - (31%)
Similarity:143/335 - (42%) Gaps:86/335 - (25%)


- Green bases have known domain annotations that are detailed below.


  Fly   327 RLFKCLTCGKDFKQKSTLLQHDRIHTDARPFPCSECGKRFRQQSHLTQHLRIHANEKPFTCPYCS 391
            :|.||.|..|.|.......:|.|.....:||.|.||...|:..|.||:|.|||..|||:.|..|.
Human   380 KLSKCETWYKGFNHSPNPSKHQRNEIGGKPFKCEECDSIFKWFSDLTKHKRIHTGEKPYKCDECG 444

  Fly   392 RSFRQRAILNQHIRIHSGEKPFACPECGKHFRQKAILNQHVRTHQDVSPHLIFKNGPHPTLWPSD 456
            :::.|.:.|::|.|||:||||:.|.||||.||..:.|:.|.|||.:..|:               
Human   445 KAYTQSSHLSEHRRIHTGEKPYQCEECGKVFRTCSSLSNHKRTHSEEKPY--------------- 494

  Fly   457 VPFPGEDNDTKGDIAGTGGGYHDEDSQGTPDGSGGMHYPSYFKDGKGQKILPEVLQHIGVRPANM 521
                                                                             
Human   495 ----------------------------------------------------------------- 494

  Fly   522 PLYVRCPICDKEFKQKTTLLQHGCIHIESRPYPCPECGKRFRQQSHLTQHLRIHTNEKPFGCMYC 586
                .|..|...|||.:.|.:|...|...:||.|.||||.|.|.|:|..|.||||.|||:.|..|
Human   495 ----TCEECGNIFKQLSDLTKHKKTHTGEKPYKCDECGKNFTQSSNLIVHKRIHTGEKPYKCEEC 555

  Fly   587 PRFFRQRTILNQHLRIHTGEKPYKCGQCGKDFRQKAILDQHTRTHQGDRPFCCPMPNCRRRFATE 651
            .|.|...:.:.:|.:.|||||||||.:|||:|.|.:.|..|.|.|.|::|:.|  ..|.:.|...
Human   556 GRVFMWFSDITKHKKTHTGEKPYKCDECGKNFTQSSNLIVHKRIHTGEKPYKC--EKCGKAFTQF 618

  Fly   652 NEVTKHIDNH 661
            :.:|.|...|
Human   619 SHLTVHESIH 628

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
jimNP_001262221.1 C2H2 Zn finger 331..351 CDD:275368 6/19 (32%)
COG5048 355..666 CDD:227381 99/307 (32%)
zf-C2H2 357..379 CDD:278523 10/21 (48%)
C2H2 Zn finger 359..379 CDD:275368 9/19 (47%)
zf-H2C2_2 371..396 CDD:290200 11/24 (46%)
C2H2 Zn finger 387..407 CDD:275368 6/19 (32%)
zf-H2C2_2 400..424 CDD:290200 15/23 (65%)
C2H2 Zn finger 415..435 CDD:275368 10/19 (53%)
C2H2 Zn finger 527..547 CDD:275368 7/19 (37%)
zf-C2H2 553..575 CDD:278523 12/21 (57%)
C2H2 Zn finger 555..575 CDD:275368 11/19 (58%)
C2H2 Zn finger 583..603 CDD:275368 5/19 (26%)
zf-H2C2_2 596..620 CDD:290200 14/23 (61%)
C2H2 Zn finger 611..631 CDD:275368 9/19 (47%)
zf-H2C2_2 624..650 CDD:290200 9/25 (36%)
C2H2 Zn finger 639..661 CDD:275368 5/21 (24%)
ZNF195NP_001123992.1 KRAB 4..64 CDD:214630
KRAB 4..43 CDD:279668
Spacer 76..243
COG5048 225..629 CDD:227381 107/335 (32%)
C2H2 Zn finger 246..266 CDD:275368
C2H2 Zn finger 274..294 CDD:275368
C2H2 Zn finger 302..345 CDD:275368
C2H2 Zn finger 384..404 CDD:275368 6/19 (32%)
C2H2 Zn finger 412..432 CDD:275368 9/19 (47%)
zf-H2C2_2 424..449 CDD:290200 11/24 (46%)
C2H2 Zn finger 440..460 CDD:275368 6/19 (32%)
zf-H2C2_2 452..477 CDD:290200 15/24 (63%)
C2H2 Zn finger 468..488 CDD:275368 10/19 (53%)
zf-H2C2_2 480..505 CDD:290200 9/108 (8%)
C2H2 Zn finger 496..516 CDD:275368 7/19 (37%)
zf-H2C2_2 508..533 CDD:290200 11/24 (46%)
C2H2 Zn finger 524..544 CDD:275368 11/19 (58%)
zf-H2C2_2 536..559 CDD:290200 12/22 (55%)
C2H2 Zn finger 552..572 CDD:275368 5/19 (26%)
zf-H2C2_2 567..589 CDD:290200 14/21 (67%)
C2H2 Zn finger 580..600 CDD:275368 9/19 (47%)
zf-H2C2_2 592..617 CDD:290200 9/26 (35%)
C2H2 Zn finger 608..628 CDD:275368 5/21 (24%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR24384
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
User_Submission 00.000 Not matched by this tool.
22.010

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