DRSC/TRiP Functional Genomics Resources

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Protein Alignment jim and ZNF66

DIOPT Version :10

Sequence 1:NP_001262221.1 Gene:jim / 43924 FlyBaseID:FBgn0027339 Length:938 Species:Drosophila melanogaster
Sequence 2:XP_054185557.1 Gene:ZNF66 / 7617 HGNCID:13135 Length:601 Species:Homo sapiens


Alignment Length:395 Identity:128/395 - (32%)
Similarity:185/395 - (46%) Gaps:72/395 - (18%)


- Green bases have known domain annotations that are detailed below.


  Fly   323 HSDLRLFKCLTCGKDFKQKSTLLQHDRIHTDARPFPCSECGKRFRQQSHLTQHLRIHANEKPFTC 387
            |:..:.:||..|||.|.:.|.|..|.:|||..:|:.|.||||.|::.|.||.|.|||..|||:.|
Human   223 HTGEKRYKCEDCGKAFNRSSNLTTHKKIHTGEKPYKCEECGKAFKRSSILTTHKRIHTGEKPYKC 287

  Fly   388 PYCSRSFRQRAILNQHIRIHSGEKPFACPECGKHFRQKAILNQHVRTHQDVSPHLIFKNG----- 447
            ..|.:.|:..:.|:.|..||:||||:.|.||||.|...:.|..|.|.|....|:...:.|     
Human   288 EECGKVFKYLSSLSTHKIIHTGEKPYKCEECGKAFNWSSHLTTHKRIHTGEKPYKCEECGKGFKY 352

  Fly   448 -----PHPTLWPSDVPFPGED---------NDTKGDIAGTGGGYHDEDSQGTPDGSGGMHYPSYF 498
                 .|..:...:.|:..|:         :.|...|..||...:..:..|           ..|
Human   353 SSTLTKHKIIHTGEKPYKCEECGEAFKYSCSLTAHKIIHTGKKPYKCEECG-----------KVF 406

  Fly   499 KD----GKGQKILPEVLQHIGVRPANMPLYVRCPICDKEFKQKTTLLQHGCIHIESRPYPCPECG 559
            |.    .|.::|      |.|.:|      .:|..|.|.|.:.:.|..|..||...:||.|.:||
Human   407 KHSSPLSKHKRI------HAGEKP------YKCEECGKAFSRSSILTTHKIIHTGEKPYECEDCG 459

  Fly   560 KRFRQQSHLTQHLRIHTNEKPFGCMYCPRFFRQRTILNQHLRIHTGEKPYKCGQCGKDFRQKAIL 624
            |.|.:.|:||:|.:|||.|||:.|..|.:.|:..:||..|.||||.:|||||.:|||||:..:.|
Human   460 KAFNRSSNLTKHKKIHTGEKPYKCEECGKAFKCSSILTTHKRIHTADKPYKCEECGKDFKYSSTL 524

  Fly   625 DQHTRTHQGDRPFCCP----------------------MPN----CRRRFATENEVTKHIDNHMN 663
            .:|.|.|.|::|:.|.                      .|:    |.:.|.:.:.:::|...||.
Human   525 TRHKRIHTGEKPYKCEECGKAFNHPATLFSHKKIHTGGKPHKCNKCGKAFISSSNLSRHEIIHMG 589

  Fly   664 PNTTK 668
            .|..|
Human   590 GNPYK 594

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
jimNP_001262221.1 C2H2 Zn finger 331..351 CDD:275368 8/19 (42%)
COG5048 355..666 CDD:227381 113/359 (31%)
C2H2 Zn finger 359..379 CDD:275368 11/19 (58%)
C2H2 Zn finger 387..407 CDD:275368 5/19 (26%)
C2H2 Zn finger 415..435 CDD:275368 9/19 (47%)
C2H2 Zn finger 527..547 CDD:275368 6/19 (32%)
C2H2 Zn finger 555..575 CDD:275368 9/19 (47%)
C2H2 Zn finger 583..603 CDD:275368 7/19 (37%)
C2H2 Zn finger 611..631 CDD:275368 9/19 (47%)
C2H2 Zn finger 639..661 CDD:275368 5/47 (11%)
ZNF66XP_054185557.1 KRAB 4..64 CDD:214630
C2H2 Zn finger 147..167 CDD:275368
C2H2 Zn finger 176..195 CDD:275368
COG5048 199..583 CDD:227381 123/382 (32%)
C2H2 Zn finger 203..223 CDD:275368 128/395 (32%)
C2H2 Zn finger 231..251 CDD:275368 8/19 (42%)
C2H2 Zn finger 259..279 CDD:275368 11/19 (58%)
C2H2 Zn finger 287..307 CDD:275368 5/19 (26%)
C2H2 Zn finger 315..335 CDD:275368 9/19 (47%)
C2H2 Zn finger 343..363 CDD:275368 2/19 (11%)
C2H2 Zn finger 371..391 CDD:275368 3/19 (16%)
C2H2 Zn finger 399..419 CDD:275368 5/36 (14%)
C2H2 Zn finger 427..447 CDD:275368 6/19 (32%)
C2H2 Zn finger 455..475 CDD:275368 9/19 (47%)
C2H2 Zn finger 483..503 CDD:275368 7/19 (37%)
C2H2 Zn finger 511..531 CDD:275368 9/19 (47%)
C2H2 Zn finger 539..559 CDD:275368 1/19 (5%)
C2H2 Zn finger 567..587 CDD:275368 3/19 (16%)
Blue background indicates that the domain is not in the aligned region.

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