DRSC/TRiP Functional Genomics Resources

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Protein Alignment jim and ZNF66

DIOPT Version :9

Sequence 1:NP_001262221.1 Gene:jim / 43924 FlyBaseID:FBgn0027339 Length:938 Species:Drosophila melanogaster
Sequence 2:NP_001342126.2 Gene:ZNF66 / 7617 HGNCID:13135 Length:573 Species:Homo sapiens


Alignment Length:369 Identity:126/369 - (34%)
Similarity:181/369 - (49%) Gaps:48/369 - (13%)


- Green bases have known domain annotations that are detailed below.


  Fly   323 HSDLRLFKCLTCGKDFKQKSTLLQHDRIHTDARPFPCSECGKRFRQQSHLTQHLRIHANEKPFTC 387
            |:..:.:||..|||.|.:.|.|..|.:|||..:|:.|.||||.|::.|.||.|.|||..|||:.|
Human   223 HTGEKRYKCEDCGKAFNRSSNLTTHKKIHTGEKPYKCEECGKAFKRSSILTTHKRIHTGEKPYKC 287

  Fly   388 PYCSRSFRQRAILNQHIRIHSGEKPFACPECGKHFRQKAILNQHVRTHQDVSPHLIFKNG----- 447
            ..|.:.|:..:.|:.|..||:||||:.|.||||.|...:.|..|.|.|....|:...:.|     
Human   288 EECGKVFKYLSSLSTHKIIHTGEKPYKCEECGKAFNWSSHLTTHKRIHTGEKPYKCEECGKGFKY 352

  Fly   448 -----PHPTLWPSDVPFPGED---------NDTKGDIAGTGGGYHDEDSQGTPDGSGGMHYPSYF 498
                 .|..:...:.|:..|:         :.|...|..||...:..:..|           ..|
Human   353 SSTLTKHKIIHTGEKPYKCEECGEAFKYSCSLTAHKIIHTGKKPYKCEECG-----------KVF 406

  Fly   499 KD----GKGQKILPEVLQHIGVRPANMPLYVRCPICDKEFKQKTTLLQHGCIHIESRPYPCPECG 559
            |.    .|.::|      |.|.:|      .:|..|.|.|.:.:.|..|..||...:||.|.:||
Human   407 KHSSPLSKHKRI------HTGEKP------YKCEECGKAFSRSSILTTHKIIHTGEKPYECEDCG 459

  Fly   560 KRFRQQSHLTQHLRIHTNEKPFGCMYCPRFFRQRTILNQHLRIHTGEKPYKCGQCGKDFRQKAIL 624
            |.|.:.|:||:|.:|||.|||:.|..|.:.|:..:||..|.||||.:|||||.:|||||:..:.|
Human   460 KAFNRSSNLTKHKKIHTGEKPYKCEECGKAFKCSSILTTHKRIHTADKPYKCEECGKDFKYSSTL 524

  Fly   625 DQHTRTHQGDRPFCCPMPNCRRRFATENEVTKHIDNHMNPNTTK 668
            .:|.:.|.|.:|..|  ..|.:.|.:.:.:::|...||..|..|
Human   525 TRHKKIHTGGKPHKC--NKCGKAFISSSNLSRHEIIHMGGNPYK 566

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
jimNP_001262221.1 C2H2 Zn finger 331..351 CDD:275368 8/19 (42%)
COG5048 355..666 CDD:227381 111/333 (33%)
zf-C2H2 357..379 CDD:278523 11/21 (52%)
C2H2 Zn finger 359..379 CDD:275368 11/19 (58%)
zf-H2C2_2 371..396 CDD:290200 12/24 (50%)
C2H2 Zn finger 387..407 CDD:275368 5/19 (26%)
zf-H2C2_2 400..424 CDD:290200 14/23 (61%)
C2H2 Zn finger 415..435 CDD:275368 9/19 (47%)
C2H2 Zn finger 527..547 CDD:275368 6/19 (32%)
zf-C2H2 553..575 CDD:278523 10/21 (48%)
C2H2 Zn finger 555..575 CDD:275368 9/19 (47%)
C2H2 Zn finger 583..603 CDD:275368 7/19 (37%)
zf-H2C2_2 596..620 CDD:290200 16/23 (70%)
C2H2 Zn finger 611..631 CDD:275368 8/19 (42%)
zf-H2C2_2 624..650 CDD:290200 8/25 (32%)
C2H2 Zn finger 639..661 CDD:275368 4/21 (19%)
ZNF66NP_001342126.2 KRAB 4..64 CDD:214630
C2H2 Zn finger 147..167 CDD:275368
C2H2 Zn finger 176..195 CDD:275368
COG5048 199..569 CDD:227381 126/369 (34%)
C2H2 Zn finger 203..223 CDD:275368 126/369 (34%)
C2H2 Zn finger 231..251 CDD:275368 8/19 (42%)
C2H2 Zn finger 259..279 CDD:275368 11/19 (58%)
C2H2 Zn finger 287..307 CDD:275368 5/19 (26%)
C2H2 Zn finger 315..335 CDD:275368 9/19 (47%)
C2H2 Zn finger 343..363 CDD:275368 2/19 (11%)
C2H2 Zn finger 371..391 CDD:275368 3/19 (16%)
C2H2 Zn finger 399..419 CDD:275368 5/36 (14%)
C2H2 Zn finger 427..447 CDD:275368 6/19 (32%)
C2H2 Zn finger 455..475 CDD:275368 9/19 (47%)
C2H2 Zn finger 483..503 CDD:275368 7/19 (37%)
C2H2 Zn finger 511..531 CDD:275368 8/19 (42%)
C2H2 Zn finger 539..559 CDD:275368 4/21 (19%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR24384
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
User_Submission 00.000 Not matched by this tool.
22.010

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