DRSC/TRiP Functional Genomics Resources

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Protein Alignment jim and ZNF708

DIOPT Version :10

Sequence 1:NP_001262221.1 Gene:jim / 43924 FlyBaseID:FBgn0027339 Length:938 Species:Drosophila melanogaster
Sequence 2:NP_067092.2 Gene:ZNF708 / 7562 HGNCID:12945 Length:563 Species:Homo sapiens


Alignment Length:361 Identity:123/361 - (34%)
Similarity:170/361 - (47%) Gaps:56/361 - (15%)


- Green bases have known domain annotations that are detailed below.


  Fly   323 HSDLRLFKCLTCGKDFKQKSTLLQHDRIHTDARPFPCSECGKRFRQQSHLTQHLRIHANEKPFTC 387
            |:..:|:||..|||.|.:.|.|.:|..:||..:|:.|.||||.|:|.|:||.|.:||..|||:.|
Human   246 HTGEKLYKCEECGKAFNRSSNLTKHKIVHTGEKPYKCEECGKAFKQSSNLTNHKKIHTGEKPYKC 310

  Fly   388 PYCSRSFRQRAILNQHIRIHSGEKPFACPECGKHFRQKAILNQHVRTHQDVSPHLIFKNGP---- 448
            ..|.::|...:.|..|.|||:||||:.|.||||.|...:.|.:|...|.:..|:...:.|.    
Human   311 GECGKAFTLSSHLTTHKRIHTGEKPYKCEECGKAFSVFSTLTKHKIIHTEEKPYKCEECGKAFNR 375

  Fly   449 ------HPTLWPSDVPFPGEDND---TKGDIAGTGGGYHDEDSQGTPDGSGGMHYPSYFKDGKGQ 504
                  |..:...:.|:..|:..   ||....    .||                          
Human   376 SSHLTNHKVIHTGEKPYKCEECGKAFTKSSTL----TYH-------------------------- 410

  Fly   505 KILPEVLQHIGVRPANMPLYVRCPICDKEFKQKTTLLQHGCIHIESRPYPCPECGKRFRQQSHLT 569
            |::     |.|.:|      .:|..|.|.|...:.|.:|..||.|.:||.|.||||.|...|:.|
Human   411 KVI-----HTGKKP------YKCEECGKAFSIFSILTKHKVIHTEDKPYKCEECGKTFNYSSNFT 464

  Fly   570 QHLRIHTNEKPFGCMYCPRFFRQRTILNQHLRIHTGEKPYKCGQCGKDFRQKAILDQHTRTHQGD 634
            .|.:|||.|||:.|..|.:.|...:.|..|..||||||||||.:|||.|.|.:.|.:|...|.|:
Human   465 NHKKIHTGEKPYKCEECGKSFILSSHLTTHKIIHTGEKPYKCKECGKAFNQSSTLMKHKIIHTGE 529

  Fly   635 RPFCCPMPNCRRRFATENEVTKHIDNHMNPNTTKVR 670
            :|:.|  ..|.:.|.....:|||...|......|.:
Human   530 KPYKC--EECGKAFNQSPNLTKHKRIHTKEKPYKCK 563

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
jimNP_001262221.1 C2H2 Zn finger 331..351 CDD:275368 8/19 (42%)
COG5048 355..666 CDD:227381 109/323 (34%)
C2H2 Zn finger 359..379 CDD:275368 11/19 (58%)
C2H2 Zn finger 387..407 CDD:275368 6/19 (32%)
C2H2 Zn finger 415..435 CDD:275368 8/19 (42%)
C2H2 Zn finger 527..547 CDD:275368 6/19 (32%)
C2H2 Zn finger 555..575 CDD:275368 9/19 (47%)
C2H2 Zn finger 583..603 CDD:275368 5/19 (26%)
C2H2 Zn finger 611..631 CDD:275368 8/19 (42%)
C2H2 Zn finger 639..661 CDD:275368 6/21 (29%)
ZNF708NP_067092.2 KRAB 4..64 CDD:214630
zf-H2C2_2 156..177 CDD:463886
C2H2 Zn finger 170..190 CDD:275368
zf-H2C2_2 183..207 CDD:463886
C2H2 Zn finger 198..218 CDD:275368
zf-H2C2_2 210..235 CDD:463886
C2H2 Zn finger 226..246 CDD:275368 123/361 (34%)
COG5048 250..>563 CDD:227381 122/355 (34%)
C2H2 Zn finger 254..274 CDD:275368 8/19 (42%)
C2H2 Zn finger 282..302 CDD:275368 11/19 (58%)
C2H2 Zn finger 310..330 CDD:275368 6/19 (32%)
C2H2 Zn finger 338..358 CDD:275368 8/19 (42%)
C2H2 Zn finger 366..386 CDD:275368 2/19 (11%)
C2H2 Zn finger 394..414 CDD:275368 6/54 (11%)
C2H2 Zn finger 422..442 CDD:275368 6/19 (32%)
C2H2 Zn finger 450..470 CDD:275368 9/19 (47%)
C2H2 Zn finger 478..498 CDD:275368 5/19 (26%)
C2H2 Zn finger 506..526 CDD:275368 8/19 (42%)
C2H2 Zn finger 534..554 CDD:275368 6/21 (29%)
Blue background indicates that the domain is not in the aligned region.

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