DRSC/TRiP Functional Genomics Resources

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Protein Alignment jim and ZNF490

DIOPT Version :10

Sequence 1:NP_001262221.1 Gene:jim / 43924 FlyBaseID:FBgn0027339 Length:938 Species:Drosophila melanogaster
Sequence 2:NP_065765.1 Gene:ZNF490 / 57474 HGNCID:23705 Length:529 Species:Homo sapiens


Alignment Length:369 Identity:118/369 - (31%)
Similarity:155/369 - (42%) Gaps:40/369 - (10%)


- Green bases have known domain annotations that are detailed below.


  Fly   310 TGNGPGRPHK--NKPHSDLRLFKCLTCGKDFKQKSTLLQHDRIHTDARPFPCSECGKRFRQQSHL 372
            |...|...|:  .|||      ||..|||.|.:.|::..|:||||..:|:.|.||||.|......
Human   179 TEQKPNECHEYGEKPH------KCKECGKTFTRSSSIRTHERIHTGEKPYECKECGKAFAFLFSF 237

  Fly   373 TQHLRIHANEKPFTCPYCSRSFRQRAILNQHIRIHSGEKPFACPECGKHFRQKAILNQHVRTHQD 437
            ..|:|||..|.|:.|..|.::||....|.:|.:.|:||||:.|.:|||.|........|.|||..
Human   238 RNHIRIHTGETPYECKECGKAFRYLTALRRHEKNHTGEKPYKCKQCGKAFIYYQPFLTHERTHTG 302

  Fly   438 VSPHLIFKNG----------PHPTLWPSDVPFPGEDNDTKGDIAGTGGGYHDEDSQGTPDGSGGM 492
            ..|:...:.|          .|......:.||...:       .|.....|....:.....:|..
Human   303 EKPYECKQCGKAFSCPTYLRSHEKTHTGEKPFVCRE-------CGRAFFSHSSLRKHVKTHTGVQ 360

  Fly   493 HYP-----SYFKDGKGQKILPEVLQHIGVRPANMPLYVRCPICDKEFKQKTTLLQHGCIHIESRP 552
            .|.     ..||.....::....  |.|.:|      ..|..|.|.|...:.|..|..:|...:.
Human   361 PYTCKKCGEAFKSSSSCEVHERT--HFGEKP------YECKQCGKAFNSSSYLQLHERVHTGEKT 417

  Fly   553 YPCPECGKRFRQQSHLTQHLRIHTNEKPFGCMYCPRFFRQRTILNQHLRIHTGEKPYKCGQCGKD 617
            |.|.||||.|...:|...|.|.||.|||:.|..|.|.|...:.|.:|.|.|||.||.:|.||||.
Human   418 YECKECGKAFLYSTHFRIHERTHTREKPYECKQCGRVFIYFSHLRRHERSHTGVKPCECKQCGKA 482

  Fly   618 FRQKAILDQHTRTHQGDRPFCCPMPNCRRRFATENEVTKHIDNH 661
            |.....|..|.|.|.|:|||.|  ..|.:.|:....:..|...|
Human   483 FTCLNSLKVHKRIHTGERPFQC--RQCGKAFSYSKSLHVHERTH 524

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
jimNP_001262221.1 C2H2 Zn finger 331..351 CDD:275368 8/19 (42%)
COG5048 355..666 CDD:227381 100/322 (31%)
C2H2 Zn finger 359..379 CDD:275368 8/19 (42%)
C2H2 Zn finger 387..407 CDD:275368 6/19 (32%)
C2H2 Zn finger 415..435 CDD:275368 7/19 (37%)
C2H2 Zn finger 527..547 CDD:275368 6/19 (32%)
C2H2 Zn finger 555..575 CDD:275368 9/19 (47%)
C2H2 Zn finger 583..603 CDD:275368 7/19 (37%)
C2H2 Zn finger 611..631 CDD:275368 9/19 (47%)
C2H2 Zn finger 639..661 CDD:275368 4/21 (19%)
ZNF490NP_065765.1 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1..53
KRAB 56..97 CDD:460171
C2H2 Zn finger 133..150 CDD:275368
C2H2 Zn finger 158..178 CDD:275368
COG5048 192..>505 CDD:227381 111/335 (33%)
C2H2 Zn finger 196..216 CDD:275368 8/19 (42%)
C2H2 Zn finger 224..244 CDD:275368 8/19 (42%)
C2H2 Zn finger 252..272 CDD:275368 6/19 (32%)
C2H2 Zn finger 280..300 CDD:275368 7/19 (37%)
C2H2 Zn finger 308..328 CDD:275368 2/19 (11%)
C2H2 Zn finger 336..356 CDD:275368 2/26 (8%)
C2H2 Zn finger 364..384 CDD:275368 2/21 (10%)
C2H2 Zn finger 392..412 CDD:275368 6/19 (32%)
C2H2 Zn finger 420..440 CDD:275368 9/19 (47%)
C2H2 Zn finger 448..468 CDD:275368 7/19 (37%)
C2H2 Zn finger 476..496 CDD:275368 9/19 (47%)
C2H2 Zn finger 504..524 CDD:275368 4/21 (19%)
Blue background indicates that the domain is not in the aligned region.

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