DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment jim and znf646

DIOPT Version :9

Sequence 1:NP_001262221.1 Gene:jim / 43924 FlyBaseID:FBgn0027339 Length:938 Species:Drosophila melanogaster
Sequence 2:XP_021336029.1 Gene:znf646 / 561201 ZFINID:ZDB-GENE-160627-3 Length:1549 Species:Danio rerio


Alignment Length: Identity:/ - (0%)
Similarity:/ - (0%) Gaps:/ - (0%)


- Green bases have known domain annotations that are detailed below.


Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
jimNP_001262221.1 C2H2 Zn finger 331..351 CDD:275368
COG5048 355..666 CDD:227381
zf-C2H2 357..379 CDD:278523
C2H2 Zn finger 359..379 CDD:275368
zf-H2C2_2 371..396 CDD:290200
C2H2 Zn finger 387..407 CDD:275368
zf-H2C2_2 400..424 CDD:290200
C2H2 Zn finger 415..435 CDD:275368
C2H2 Zn finger 527..547 CDD:275368
zf-C2H2 553..575 CDD:278523
C2H2 Zn finger 555..575 CDD:275368
C2H2 Zn finger 583..603 CDD:275368
zf-H2C2_2 596..620 CDD:290200
C2H2 Zn finger 611..631 CDD:275368
zf-H2C2_2 624..650 CDD:290200
C2H2 Zn finger 639..661 CDD:275368
znf646XP_021336029.1 C2H2 Zn finger 45..65 CDD:275368
COG5048 69..473 CDD:227381
C2H2 Zn finger 72..92 CDD:275368
C2H2 Zn finger 100..120 CDD:275368
C2H2 Zn finger 204..224 CDD:275368
C2H2 Zn finger 231..251 CDD:275368
C2H2 Zn finger 428..448 CDD:275368
C2H2 Zn finger 455..475 CDD:275368
C2H2 Zn finger 779..822 CDD:275368
C2H2 Zn finger 835..855 CDD:275368
C2H2 Zn finger 862..882 CDD:275368
C2H2 Zn finger 890..910 CDD:275368
C2H2 Zn finger 984..1004 CDD:275368
PHA00733 <994..1063 CDD:177301
C2H2 Zn finger 1011..1031 CDD:275368
C2H2 Zn finger 1039..1055 CDD:275368
C2H2 Zn finger 1081..1097 CDD:275368
C2H2 Zn finger 1128..1148 CDD:275368
PHA00733 <1153..1199 CDD:177301
C2H2 Zn finger 1155..1175 CDD:275368
C2H2 Zn finger 1183..1203 CDD:275368
C2H2 Zn finger 1212..1232 CDD:275368
C2H2 Zn finger 1251..1271 CDD:275368
C2H2 Zn finger 1302..1322 CDD:275368
C2H2 Zn finger 1330..1350 CDD:275368
C2H2 Zn finger 1419..1439 CDD:275368
C2H2 Zn finger 1446..1466 CDD:275368
C2H2 Zn finger 1474..1494 CDD:275368
C2H2 Zn finger 1502..1522 CDD:275368
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
10.910

Return to query results.
Submit another query.