DRSC/TRiP Functional Genomics Resources

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Protein Alignment jim and zbtb47a

DIOPT Version :10

Sequence 1:NP_001262221.1 Gene:jim / 43924 FlyBaseID:FBgn0027339 Length:938 Species:Drosophila melanogaster
Sequence 2:XP_683959.6 Gene:zbtb47a / 556134 ZFINID:ZDB-GENE-081104-121 Length:671 Species:Danio rerio


Alignment Length:640 Identity:136/640 - (21%)
Similarity:207/640 - (32%) Gaps:220/640 - (34%)


- Green bases have known domain annotations that are detailed below.


  Fly   158 NQQN-PAPNQNQSSNDPQHSGSN------AGES-GNPHVQQNGGPQNDPGNSFRTPDYYDPRHAA 214
            :||| |..|.:.|..|.:.....      .|:| |||:..|....|                  :
Zfish   148 DQQNKPEGNWSDSVKDIKQEKDTTCARICGGKSEGNPYSVQVADLQ------------------S 194

  Fly   215 PQGGMLAPPGFPPLH----------------YLNKGVLPMEQSGGGGGAGGGEAYALPEMLPAQQ 263
            .|||:....|..|.:                .||...|.:.:     |..|..|...|       
Zfish   195 VQGGICKVEGKEPRNPEDPDSFNGEQIIVELNLNNQTLNVSK-----GLDGSSAAQSP------- 247

  Fly   264 NGQQNAGPA------------NTNANEGGAGANGS-------------GGVGGATGASVGVGSVG 303
            :|||.:|..            |....|.....:|.             .|.....|.||.:..:.
Zfish   248 SGQQLSGKEKSSDGTFEESRNNVTLEEEEEEEDGEQSEDEDDDDDVRLEGTSEDEGESVFLSEMK 312

  Fly   304 VTSG----GRTGNGPGRPHKNKPHSDLRL-------FKCLTCGKDFKQKSTLLQHDRIHTDARPF 357
            ..:.    .:......|...::..|:.||       |.||.|.|.|..:..|.:|..: |..|..
Zfish   313 SRASAPLVSKRSCARARQETDRDPSEERLDQDGFESFSCLRCPKTFNNRWYLEKHMNV-THNRMC 376

  Fly   358 PCSECGKRFRQQSHLTQHLRIHANEKPFTCPYCSRSFRQRAILNQHIRIHSG--EKPFACPECGK 420
            .|.:|||||...|.|..|.:... ||...|..|.::||:...|::|.:|..|  ||.:.|..|.|
Zfish   377 VCEKCGKRFLLDSELLLHQQTDC-EKSIQCLTCGKAFRKLWSLHEHNKIVHGYAEKKYTCEICEK 440

  Fly   421 HFRQKAILNQHVRTHQDVSPHLIFKNGPHPTLWPSDVPFPGEDNDTKGDIAGTGGGYHDEDSQGT 485
            .|...|.:.:|:..|                  ..::||                          
Zfish   441 KFYTMAHVRKHMVAH------------------TKEMPF-------------------------- 461

  Fly   486 PDGSGGMHYPSYFKDGKGQKILPEVLQHIGVRPANMPLYVRCPICDKEFKQKTTLLQHGCIHIES 550
                                                    .|..|.|.||:..:|..|...|...
Zfish   462 ----------------------------------------TCETCGKSFKRSMSLKVHSLQHSGE 486

  Fly   551 RPYPCPECGKRFRQQSHLTQHLRIHTNEKPFGCMYCPRFFRQRTILNQHLRIHTGEKPYKCGQCG 615
            :|:.|..|.:||:.:..|..|:.||...|.|.|.:|.:.|..:...::|::.|||||||.|..||
Zfish   487 KPFQCEVCSERFQYKYQLRSHMSIHIGHKQFMCQWCGKDFNMKQYFDEHMKTHTGEKPYICEICG 551

  Fly   616 KDFRQKAILDQHTRTHQGDRPFCCPMPNCRRRFATENEVTKHIDNHMNPNTTKVRRQQQQQHQQQ 680
            |.|..:..:.:|.|||.|::|:.|..  |.:||...|.:..|.:..:                  
Zfish   552 KSFTSRPNMKRHRRTHTGEKPYPCEA--CGQRFRFSNMLKTHREKCL------------------ 596

  Fly   681 QQQQQQQQQQQQQQNNNAVAQVANHLMNDAKSLAAQQFLNNNNPSAVDNKANILP 735
                                ||.|.|:.|:.::.  ...|.:.|..::...::.|
Zfish   597 --------------------QVRNPLLLDSSTIV--NHTNQDLPGGMETLGDVSP 629

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
jimNP_001262221.1 C2H2 Zn finger 331..351 CDD:275368 7/19 (37%)
COG5048 355..666 CDD:227381 78/312 (25%)
C2H2 Zn finger 359..379 CDD:275368 9/19 (47%)
C2H2 Zn finger 387..407 CDD:275368 6/19 (32%)
C2H2 Zn finger 415..435 CDD:275368 6/19 (32%)
C2H2 Zn finger 527..547 CDD:275368 7/19 (37%)
C2H2 Zn finger 555..575 CDD:275368 6/19 (32%)
C2H2 Zn finger 583..603 CDD:275368 4/19 (21%)
C2H2 Zn finger 611..631 CDD:275368 7/19 (37%)
C2H2 Zn finger 639..661 CDD:275368 6/21 (29%)
zbtb47aXP_683959.6 BTB_POZ 29..142 CDD:453885
C2H2 Zn finger 351..370 CDD:275368 7/18 (39%)
C2H2 Zn finger 378..397 CDD:275368 9/18 (50%)
C2H2 Zn finger 405..425 CDD:275368 6/19 (32%)
C2H2 Zn finger 435..455 CDD:275368 6/19 (32%)
zf-H2C2_2 447..472 CDD:463886 8/108 (7%)
C2H2 Zn finger 463..483 CDD:275368 7/19 (37%)
C2H2 Zn finger 491..511 CDD:275368 6/19 (32%)
C2H2 Zn finger 519..539 CDD:275368 4/19 (21%)
SFP1 <541..592 CDD:227516 21/52 (40%)
COG5048 543..>644 CDD:227381 28/129 (22%)
C2H2 Zn finger 547..567 CDD:275368 7/19 (37%)
C2H2 Zn finger 575..592 CDD:275368 5/18 (28%)
Blue background indicates that the domain is not in the aligned region.

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